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Assembly Name: uagpf v2.0

Name: Double-stranded RNA-binding-like

Term: IPR014720  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene32455 uagpf v2.0 466
• AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dea(d h)-box rna helicase family protein 0.0
Internal
uagpf_v2_unigene32806 uagpf v2.0 402
• AutoFact: dsRNA-binding protein [Brassica oleracea var. gongylodes] emb|CAD59428.1| dsRNA-binding protein [Brassica oleracea var. gemmifera] 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dsrna-binding protein 0.0
N-terminus
uagpf_v2_unigene33475 uagpf v2.0 424
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene33736 uagpf v2.0 246
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
• Blast2go: endoribonuclease dicer homolog 1-like 0.0
Coding
uagpf_v2_unigene35130 uagpf v2.0 96
• AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
• Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
unknown
uagpf_v2_unigene36529 uagpf v2.0 398
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
• Blast2go: regulatory-associated protein of tor 1-like 0.0
unknown
uagpf_v2_unigene36828 uagpf v2.0 458
• AutoFact: dsRNA-binding protein 5 [Arabidopsis thaliana] sp|Q8GY79.1|DRB5_ARATH RecName: Full=Double-stranded RNA-binding protein 5; AltName: Full=dsRNA-binding protein 5; Short=AtDRB5 dbj|BAC42450.1| unknown protein [Arabidopsis thaliana] gb|AAP75803.1| At5g41070 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: double-stranded rna-binding protein 2-like 8.05487e-35
N-terminus
uagpf_v2_unigene37314 uagpf v2.0 326
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s5 0.0
C-terminus
uagpf_v2_unigene40231 uagpf v2.0 294
• AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dsrna-binding protein 3 0.0
N-terminus
uagpf_v2_unigene40398 uagpf v2.0 347
• AutoFact: transducin/WD-40 repeat protein [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene40962 uagpf v2.0 241
• AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Solanum tuberosum RepID=Q2PYX3_SOLTU 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fructose-bisphosphate aldolase 0.0
Putative C-terminus
uagpf_v2_unigene41223 uagpf v2.0 321
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene41286 uagpf v2.0 199
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
• FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: regulatory-associated protein of tor 1-like 0.0
Internal
uagpf_v2_unigene42277 uagpf v2.0 391
• AutoFact: Unassigned protein
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
N-terminus
uagpf_v2_unigene42913 uagpf v2.0 123
• AutoFact: Glycosyl hydrolase-like protein (Fragment) n=13 Tax=Picea sitchensis RepID=E0ZH83_PICSI 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycosyl hydrolase-like protein 4.25294e-42
Internal
uagpf_v2_unigene44617 uagpf v2.0 279
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
• FL-Next: sp=Regulatory-associated protein of TOR 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: regulatory-associated protein of tor 1-like 0.0
Internal
uagpf_v2_unigene45319 uagpf v2.0 218
• AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-28
• Blast2go: atp-dependent rna helicase a-like protein 1.35295e-40
unknown
uagpf_v2_unigene45679 uagpf v2.0 352
• AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-37
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna helicase a-like protein 9.80909e-45
Internal
uagpf_v2_unigene47318 uagpf v2.0 172
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene47510 uagpf v2.0 370
• AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA 0.0
• Blast2go: double-stranded rna binding protein 0.0
Putative coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain