Sustainpine_db
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Assembly Name: uagpf v2.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene41240 uagpf v2.0 354
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RGR4_RICCO 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 1.93707e-09
Internal
uagpf_v2_unigene41288 uagpf v2.0 168
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
• FL-Next: sp=Putative DEAD-box ATP-dependent RNA helicase 29; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
Internal
uagpf_v2_unigene41377 uagpf v2.0 375
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• Blast2go: rna helicase 0.0
Coding
uagpf_v2_unigene41577 uagpf v2.0 169
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna helicase 0.0
Putative C-terminus
uagpf_v2_unigene41674 uagpf v2.0 312
• AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 35A; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box protein abstrakt 0.0
Internal
uagpf_v2_unigene42826 uagpf v2.0 298
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
uagpf_v2_unigene43008 uagpf v2.0 318
• AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 5.0e-31
• FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase q-like 5-like 2.42897e-33
Internal
uagpf_v2_unigene43563 uagpf v2.0 380
• AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 7.0e-10
• FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase q-like 5-like 2.11299e-13
Internal
uagpf_v2_unigene43584 uagpf v2.0 457
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 37; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
Internal
uagpf_v2_unigene44306 uagpf v2.0 283
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna helicase 0.0
Internal
uagpf_v2_unigene44315 uagpf v2.0 329
• AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9RFH2_RICCO 0.0
• FL-Next: sp=ATP-dependent DNA helicase Q-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase 0.0
Internal
uagpf_v2_unigene44428 uagpf v2.0 450
• AutoFact: Probable DEAD-box ATP-dependent RNA helicase 48 n=3 Tax=Arabidopsis RepID=RH48_ARATH 7.0e-32
• FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.40933e-36
Putative N-terminus
uagpf_v2_unigene44742 uagpf v2.0 275
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 31; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna helicase 0.0
Internal
uagpf_v2_unigene45192 uagpf v2.0 245
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene45210 uagpf v2.0 284
• AutoFact: putative Sec63 domain containing protein [Oryza sativa Japonica Group] gb|ABF98818.1| U5 small nuclear ribonucleoprotein 200 kDa helicase, putative [Oryza sativa Japonica Group] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 4.80816e-29
Internal
uagpf_v2_unigene45310 uagpf v2.0 351
• AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
N-terminus
uagpf_v2_unigene45319 uagpf v2.0 218
• AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-28
• Blast2go: atp-dependent rna helicase a-like protein 1.35295e-40
unknown
uagpf_v2_unigene45679 uagpf v2.0 352
• AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-37
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna helicase a-like protein 9.80909e-45
Internal
uagpf_v2_unigene46399 uagpf v2.0 362
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna helicase 0.0
Putative N-terminus
uagpf_v2_unigene46485 uagpf v2.0 208
• AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain