Sustainpine_db
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Assembly Name: uagpf v2.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene31959 uagpf v2.0 728
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 13 0.0
C-terminus
uagpf_v2_unigene32002 uagpf v2.0 293
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene32020 uagpf v2.0 727
• AutoFact: RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana] gb|AAC67203.2| expressed protein [Arabidopsis thaliana] gb|AAO64196.1| putative DEAD/DEAH box RNA helicase (HUA ENHANCER2) [Arabidopsis thaliana] gb|AEC06028.1| RNA helicase, ATP-depend 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hua enhancer 2 0.0
C-terminus
uagpf_v2_unigene32080 uagpf v2.0 309
• AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 7; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
Internal
uagpf_v2_unigene32455 uagpf v2.0 466
• AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dea(d h)-box rna helicase family protein 0.0
Internal
uagpf_v2_unigene33122 uagpf v2.0 147
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
• FL-Next: sp=Putative DEAD-box ATP-dependent RNA helicase 29; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
Internal
uagpf_v2_unigene33475 uagpf v2.0 424
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene33736 uagpf v2.0 246
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
• Blast2go: endoribonuclease dicer homolog 1-like 0.0
Coding
uagpf_v2_unigene33776 uagpf v2.0 415
• AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
• Blast2go: dead-box protein abstrakt 0.0
Coding
uagpf_v2_unigene33978 uagpf v2.0 422
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box helicase 0.0
Internal
uagpf_v2_unigene34256 uagpf v2.0 156
• AutoFact: DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana] sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18 dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AED90875.1| DEAD-box ATP-dependent 9.0e-27
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 18-like 6.30339e-35
Internal
uagpf_v2_unigene34264 uagpf v2.0 352
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• Blast2go: rna helicase 0.0
Coding
uagpf_v2_unigene34904 uagpf v2.0 279
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal
uagpf_v2_unigene34978 uagpf v2.0 119
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 5.0e-07
• Blast2go: probable atp-dependent rna helicase ythdc2-like 2.25235e-16
unknown
uagpf_v2_unigene35577 uagpf v2.0 299
• AutoFact: putative Helicase SKI2W [Oryza sativa Japonica Group] 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene35588 uagpf v2.0 124
• AutoFact: MIP-T3 multi-domain protein 8.0e-16
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
uagpf_v2_unigene35608 uagpf v2.0 285
• AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
• Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
unknown
uagpf_v2_unigene35864 uagpf v2.0 105
• AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
• Blast2go: atp-dependent dna helicase q-like 2 0.0
unknown
uagpf_v2_unigene36440 uagpf v2.0 543
• AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
• Blast2go: dead-box atp-dependent rna helicase 0.0
unknown
uagpf_v2_unigene36760 uagpf v2.0 475
• AutoFact: ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana] sp|Q9FT73.1|RQL2_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 2; AltName: Full=RecQ-like protein 2; Short=AtRecQ2; Short=AtRecQl2 emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana] gb|AE 3.99931e-42
• FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase q-like 2-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain