Sustainpine_db
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Assembly Name: uagpf v2.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene8922 uagpf v2.0 263
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: atp-dependent rna 0.0
Internal
uagpf_v2_unigene8924 uagpf v2.0 309
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein Sb01g042980; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: activating signal cointegrator 1 complex subunit 9.49091e-28
Internal
uagpf_v2_unigene9257 uagpf v2.0 700
• AutoFact: DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana] sp|Q84TG1.1|RH57_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 57 gb|AAO64768.1| At3g09720 [Arabidopsis thaliana] dbj|BAE99340.1| RNA helicase like protein [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 57 0.0
Internal
uagpf_v2_unigene9506 uagpf v2.0 1690
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
C-terminus
uagpf_v2_unigene9700 uagpf v2.0 1148
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 8 dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group] dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japon 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
C-terminus
uagpf_v2_unigene9749 uagpf v2.0 333
• AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] dbj|BAB10376.1| RNA helicase [Arabidopsis thaliana] gb|AED97426.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: activating signal cointegrator 1 complex subunit 0.0
Internal
uagpf_v2_unigene9826 uagpf v2.0 811
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Internal
uagpf_v2_unigene9944 uagpf v2.0 578
• AutoFact: Putative helicase n=1 Tax=Oryza sativa RepID=Q8W302_ORYSA 7.0e-17
• Blast2go: probable atp-dependent rna helicase dhx36-like 1.73412e-18
Putative coding
uagpf_v2_unigene10268 uagpf v2.0 145
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal
uagpf_v2_unigene10450 uagpf v2.0 1543
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SYU7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
C-terminus
uagpf_v2_unigene11032 uagpf v2.0 920
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
C-terminus
uagpf_v2_unigene11065 uagpf v2.0 1153
• AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
C-terminus
uagpf_v2_unigene11633 uagpf v2.0 753
• AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein transport protein sec31 0.0
Putative C-terminus
uagpf_v2_unigene12137 uagpf v2.0 580
• AutoFact: Eukaryotic initiation factor 4A-1 n=67 Tax=Magnoliophyta RepID=IF4A1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic initiation factor 4a 0.0
N-terminus
uagpf_v2_unigene12237 uagpf v2.0 677
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
N-terminus
uagpf_v2_unigene12802 uagpf v2.0 694
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8B1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase like protein 0.0
Internal
uagpf_v2_unigene12888 uagpf v2.0 574
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
• Blast2go: dead box rna helicase 0.0
Coding
uagpf_v2_unigene12920 uagpf v2.0 460
• AutoFact: FAP multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene13226 uagpf v2.0 572
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein helicase 0.0
C-terminus
uagpf_v2_unigene13227 uagpf v2.0 452
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain