Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Helicase-associated domain

Term: IPR007502  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene26931 uagpf v2.0 353
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
N-terminus
uagpf_v2_unigene28279 uagpf v2.0 537
AutoFact: Helicase domain-containing protein n=4 Tax=Arabidopsis RepID=D7MLJ1_ARALL 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal
uagpf_v2_unigene28416 uagpf v2.0 366
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
N-terminus
uagpf_v2_unigene29715 uagpf v2.0 356
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AAK96883.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AAM91118.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AEE30889.1| helicase associated d 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp-dependent rna 1.51155e-30
C-terminus
uagpf_v2_unigene30404 uagpf v2.0 403
AutoFact: Polyketide_cyc2 multi-domain protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
C-terminus
uagpf_v2_unigene31648 uagpf v2.0 332
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene32264 uagpf v2.0 420
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
C-terminus
uagpf_v2_unigene32455 uagpf v2.0 466
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dea(d h)-box rna helicase family protein 0.0
Internal
uagpf_v2_unigene32781 uagpf v2.0 205
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Internal
uagpf_v2_unigene33391 uagpf v2.0 213
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-21
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 1.73946e-25
Internal
uagpf_v2_unigene34978 uagpf v2.0 119
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 5.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 2.25235e-16
unknown
uagpf_v2_unigene37907 uagpf v2.0 531
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983869 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g028590; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16 0.0
C-terminus
uagpf_v2_unigene39926 uagpf v2.0 435
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD35820.1| putative RNA helicase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: deah-box nuclear pre-mrna splicing factor 0.0
Putative C-terminus
uagpf_v2_unigene40962 uagpf v2.0 241
AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Solanum tuberosum RepID=Q2PYX3_SOLTU 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
Putative C-terminus
uagpf_v2_unigene41339 uagpf v2.0 468
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
unknown
uagpf_v2_unigene41777 uagpf v2.0 412
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD35820.1| putative RNA helicase [Oryza sativa Japonica Group] 0.0
Blast2go: deah-box nuclear pre-mrna splicing factor 0.0
unknown
uagpf_v2_unigene43924 uagpf v2.0 301
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 3.36312e-44
Internal
uagpf_v2_unigene45319 uagpf v2.0 218
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-28
Blast2go: atp-dependent rna helicase a-like protein 1.35295e-40
unknown
uagpf_v2_unigene45679 uagpf v2.0 352
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-37
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 9.80909e-45
Internal
uagpf_v2_unigene49049 uagpf v2.0 274
AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain