Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4819 uagpf v2.0 940
AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 2.0e-16
FL-Next: tr=DREB protein; Taxus cuspidata (Japanese yew). 0.0
Blast2go: ap2 erf domain-containing transcription factor 8.11769e-19
N-terminus
uagpf_v2_unigene4891 uagpf v2.0 672
AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: activating signal cointegrator 1 complex subunit 0.0
C-terminus
uagpf_v2_unigene5143 uagpf v2.0 979
AutoFact: PRP38 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: pre-mrna-splicing factor 38b 0.0
C-terminus
uagpf_v2_unigene5170 uagpf v2.0 476
AutoFact: Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
uagpf_v2_unigene5280 uagpf v2.0 693
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8B1_RICCO 0.0
Blast2go: rna helicase like protein 0.0
Putative coding
uagpf_v2_unigene5294 uagpf v2.0 596
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 9.99995e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene5332 uagpf v2.0 371
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
unknown
uagpf_v2_unigene5469 uagpf v2.0 1449
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene5685 uagpf v2.0 834
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 8.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 1.96745e-10
Putative coding
uagpf_v2_unigene5750 uagpf v2.0 625
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box-like rna helicase 0.0
C-terminus
uagpf_v2_unigene5800 uagpf v2.0 787
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 5.0e-30
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 3.90336e-34
unknown
uagpf_v2_unigene5996 uagpf v2.0 558
AutoFact: HhH-GPD base excision DNA repair protein-related-like [Oryza sativa Japonica Group] dbj|BAD37897.1| HhH-GPD base excision DNA repair protein-related-like [Oryza sativa Japonica Group] gb|EEC80299.1| hypothetical protein OsI_22321 [Oryza sativa Indica Grou 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene6079 uagpf v2.0 518
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H8S6_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase-like transcription factor 0.0
Internal
uagpf_v2_unigene6884 uagpf v2.0 1257
AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein transport protein sec31 0.0
Internal
uagpf_v2_unigene7104 uagpf v2.0 565
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Putative coding
uagpf_v2_unigene7260 uagpf v2.0 2398
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
uagpf_v2_unigene7268 uagpf v2.0 633
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7338 uagpf v2.0 476
AutoFact: Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] 0.0
Coding
uagpf_v2_unigene7490 uagpf v2.0 454
AutoFact: putative F-box and leucine-rich repeat protein [Jatropha curcas] 0.0
FL-Next: tr=Glucose regulated repressor protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: f-box lrr-repeat protein 2-like 0.0
N-terminus
uagpf_v2_unigene7501 uagpf v2.0 505
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tata box binding protein associated factor-like protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain