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Assembly Name: uagpf v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene18151 uagpf v2.0 547
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
unknown
uagpf_v2_unigene18262 uagpf v2.0 1054
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18645 uagpf v2.0 1159
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Putative C-terminus
uagpf_v2_unigene18822 uagpf v2.0 664
AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein transport protein sec31 0.0
C-terminus
uagpf_v2_unigene18923 uagpf v2.0 817
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 1.0e-08
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 17; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 17-like 1.19001e-10
C-terminus
uagpf_v2_unigene19143 uagpf v2.0 1394
AutoFact: Eukaryotic initiation factor 4A-1 n=67 Tax=Magnoliophyta RepID=IF4A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4a 0.0
C-terminus
uagpf_v2_unigene19492 uagpf v2.0 841
AutoFact: pfam10545, MADF_DNA_bdg, Alcohol dehydrogenase transcription factor Myb/SANT-like 7.0e-05
Blast2go: protein 0.0
Coding
uagpf_v2_unigene25019 uagpf v2.0 508
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
uagpf_v2_unigene25101 uagpf v2.0 520
AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 0.0
Blast2go: dead-box atp-dependent rna helicase 39 0.0
unknown
uagpf_v2_unigene25783 uagpf v2.0 592
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene25885 uagpf v2.0 584
AutoFact: Cytochrome P450 monooxygenase CYP86A24 n=1 Tax=Glycine max RepID=Q2LAK8_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
uagpf_v2_unigene25943 uagpf v2.0 804
AutoFact: cytochrome P450 [Brassica rapa subsp. pekinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
uagpf_v2_unigene26050 uagpf v2.0 451
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.0e-13
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 24 1.2582e-16
N-terminus
uagpf_v2_unigene26261 uagpf v2.0 506
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene26735 uagpf v2.0 297
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RC60_RICCO 0.0
Blast2go: atp-dependent rna helicase 0.0
Putative coding
uagpf_v2_unigene26931 uagpf v2.0 353
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
N-terminus
uagpf_v2_unigene27021 uagpf v2.0 724
AutoFact: PRP38_assoc multi-domain protein 3.0e-09
Coding
uagpf_v2_unigene27026 uagpf v2.0 399
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 9-like 0.0
Internal
uagpf_v2_unigene27342 uagpf v2.0 261
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene27639 uagpf v2.0 487
AutoFact: cytochrome P450, family 94, subfamily B, polypeptide 3 [Arabidopsis thaliana] emb|CAB62341.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAU05455.1| At3g48520 [Arabidopsis thaliana] gb|AAU94404.1| At3g48520 [Arabidopsis thaliana] dbj|BAE98488. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 94a1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain