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Assembly Name: uagpf v2.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene8337 uagpf v2.0 636
AutoFact: ATP-binding cassette transporter (Fragment) n=2 Tax=Selaginella moellendorffii RepID=D8T898_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 0.0
Internal
uagpf_v2_unigene8402 uagpf v2.0 375
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 5 0.0
Internal
uagpf_v2_unigene8436 uagpf v2.0 683
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8SFU8_SELML 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 2.325e-38
C-terminus
uagpf_v2_unigene8544 uagpf v2.0 698
AutoFact: putative kinase-like protein TMKL1 [Arabidopsis thaliana] sp|P33543.1|TMKL1_ARATH RecName: Full=Putative kinase-like protein TMKL1; Flags: Precursor emb|CAA51385.1| TMKL1 [Arabidopsis thaliana] dbj|BAB01215.1| receptor kinase [Arabidopsis thaliana] gb|AAM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinase-like protein tmkl1-like 0.0
Internal
uagpf_v2_unigene8549 uagpf v2.0 319
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene8688 uagpf v2.0 703
AutoFact: Probable pleiotropic drug resistance protein 1 n=6 Tax=Oryza sativa RepID=PDR1_ORYSJ 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pdr-like abc transporter 5.01164e-39
Putative N-terminus
uagpf_v2_unigene8713 uagpf v2.0 618
AutoFact: monosaccharide transporter1 [Zea mays] gb|AAT90503.1| monosaccharide transport protein 1 [Zea mays] gb|ACG28751.1| sugar transport protein 1 [Zea mays] 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.20942e-27
N-terminus
uagpf_v2_unigene8752 uagpf v2.0 730
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene8887 uagpf v2.0 431
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb03g027370; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: amino acid permease 1.3175e-41
C-terminus
uagpf_v2_unigene8927 uagpf v2.0 384
AutoFact: acyl-CoA dehydrogenase [Arabidopsis thaliana] gb|AAM14036.1| unknown protein [Arabidopsis thaliana] gb|AAN86198.1| unknown protein [Arabidopsis thaliana] gb|AEE74461.1| acyl-CoA dehydrogenase [Arabidopsis thaliana] 0.0
FL-Next: tr=F3E22.6 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: acyl- dehydrogenase 0.0
N-terminus
uagpf_v2_unigene9097 uagpf v2.0 370
AutoFact: STRUBBELIG-receptor family 8 protein [Arabidopsis thaliana] sp|Q6R2J8.1|SRF8_ARATH RecName: Full=Protein STRUBBELIG-RECEPTOR FAMILY 8; AltName: Full=Leucine-rich repeat receptor kinase-like protein SRF8; Flags: Precursor gb|AAR99876.1| strubbelig receptor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: strubbelig-receptor family 8 protein 0.0
Internal
uagpf_v2_unigene9209 uagpf v2.0 351
AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 3.00004e-41
FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
uagpf_v2_unigene9278 uagpf v2.0 226
AutoFact: Glycosyl transferase, family 48 [Medicago truncatula] 0.0
FL-Next: sp=Callose synthase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 3-like 0.0
Internal
uagpf_v2_unigene9445 uagpf v2.0 609
AutoFact: Isochorismatase family protein [Arabidopsis thaliana] gb|AAL25541.1| AT3g16190/MYA6_2 [Arabidopsis thaliana] gb|AAM64447.1| putative hydrolase [Arabidopsis thaliana] gb|AAN28858.1| At3g16190/MYA6_2 [Arabidopsis thaliana] gb|AEE75782.1| Isochorismatase fam 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxyureidoacrylate ureidoacrylate amidohydrolase -like 0.0
Putative Complete
uagpf_v2_unigene9642 uagpf v2.0 619
AutoFact: ABC transporter F family member 3 [Arabidopsis thaliana] sp|Q8H0V6.1|AB3F_ARATH RecName: Full=ABC transporter F family member 3; Short=ABC transporter ABCF.3; Short=AtABCF3; AltName: Full=GCN20-type ATP-binding cassette protein GCN3 gb|AAN72026.1| ABC tra 0.0
FL-Next: sp=ABC transporter F family member 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter family protein 0.0
N-terminus
uagpf_v2_unigene9723 uagpf v2.0 615
AutoFact: RecName: Full=Probable metal-nicotianamine transporter YSL6; AltName: Full=Protein YELLOW STRIPE LIKE 6; Short=OsYSL6 emb|CAE02278.1| OSJNBa0055C08.1 [Oryza sativa Japonica Group] dbj|BAG94466.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable metal-nicotianamine transporter ysl6-like isoform 1 0.0
N-terminus
uagpf_v2_unigene10034 uagpf v2.0 488
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 0.0
Internal
uagpf_v2_unigene10038 uagpf v2.0 936
AutoFact: protein kinase family protein [Arabidopsis thaliana] ref|NP_001190331.1| protein kinase family protein [Arabidopsis thaliana] gb|ABE66165.1| protein kinase family protein [Arabidopsis thaliana] gb|AED92585.1| protein kinase family protein [Arabidopsis tha 0.0
Blast2go: protein kinase 0.0
Coding
uagpf_v2_unigene10225 uagpf v2.0 423
AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 2.0e-39
FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter b family member 20-like 1.43031e-40
Internal
uagpf_v2_unigene10447 uagpf v2.0 400
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GRC2_POPTR 0.0
FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain