Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene31181 uagpf v2.0 372
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 0.0
• Blast2go: heat shock factor 0.0
unknown
uagpf_v2_unigene31503 uagpf v2.0 584
• AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: telomere repeat binding factor 1 0.0
N-terminus
uagpf_v2_unigene31991 uagpf v2.0 302
• AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lupus la 0.0
C-terminus
uagpf_v2_unigene32226 uagpf v2.0 460
• AutoFact: pfam00294, PfkB, pfkB family carbohydrate kinase 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: carbohydrate pyrimidine family protein 0.0
N-terminus
uagpf_v2_unigene32495 uagpf v2.0 313
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene32631 uagpf v2.0 231
• AutoFact: Glutaredoxin-related-like protein n=3 Tax=Oryza sativa RepID=Q67UI1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: vacuolar membrane-associated protein iml1 0.0
Internal
uagpf_v2_unigene33951 uagpf v2.0 80
• AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
uagpf_v2_unigene34154 uagpf v2.0 278
• AutoFact: Auxin-resistance protein 6 (Fragment) n=2 Tax=Arabidopsis thaliana RepID=A5YXU7_ARATH 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin-resistance protein 6 0.0
Internal
uagpf_v2_unigene34411 uagpf v2.0 382
• AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
• FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase 6 subunit a-like 0.0
Internal
uagpf_v2_unigene34811 uagpf v2.0 252
• AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
• Blast2go: 70 kda peptidyl-prolyl isomerase 0.0
unknown
uagpf_v2_unigene35151 uagpf v2.0 285
• AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
• Blast2go: telomere repeat binding factor 1 0.0
unknown
uagpf_v2_unigene35192 uagpf v2.0 248
• AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: telomere repeat binding factor 1 0.0
N-terminus
uagpf_v2_unigene35863 uagpf v2.0 246
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna sigma 70 subfamily 0.0
Putative C-terminus
uagpf_v2_unigene35945 uagpf v2.0 432
• AutoFact: putative reverse-transcriptase-like protein [Arabidopsis thaliana] emb|CAB78181.1| putative reverse-transcriptase-like protein [Arabidopsis thaliana] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse-transcriptase-like protein 3.63293e-32
Putative Complete
uagpf_v2_unigene36029 uagpf v2.0 513
• AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iif subunit 0.0
C-terminus
uagpf_v2_unigene36106 uagpf v2.0 684
• AutoFact: replication protein A 30kDa [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: replication protein a 32 kda subunit 0.0
C-terminus
uagpf_v2_unigene36219 uagpf v2.0 367
• AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 5.99994e-41
• Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown
uagpf_v2_unigene36459 uagpf v2.0 374
• AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 0.0
• Blast2go: btb poz domain-containing protein at1g30440-like 0.0
unknown
uagpf_v2_unigene36682 uagpf v2.0 319
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
• Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
Internal
uagpf_v2_unigene36715 uagpf v2.0 405
• AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
• Blast2go: telomere repeat binding factor 1 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain