Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene50227 uagpf v2.0 295
AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 4.0e-17
Blast2go: cullin 3b 2.24996e-21
unknown
uagpf_v2_unigene50441 uagpf v2.0 407
AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 6 subunit a-like 0.0
N-terminus
uagpf_v2_unigene50531 uagpf v2.0 380
AutoFact: cullin 4 [Arabidopsis thaliana] 0.0
Blast2go: ubiquitin-protein cullin 4 0.0
unknown
uagpf_v2_unigene51068 uagpf v2.0 528
AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
Blast2go: clathrin binding 0.0
unknown
uagpf_v2_unigene51222 uagpf v2.0 269
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-35
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 1.06569e-41
Internal
uagpf_v2_unigene51318 uagpf v2.0 438
AutoFact: Os01g0570500 protein n=3 Tax=Oryza sativa RepID=Q656Y0_ORYSJ 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene51589 uagpf v2.0 396
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
Blast2go: histone h1-like protein 0.0
Coding
uagpf_v2_unigene51590 uagpf v2.0 371
AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein at1g30440-like 0.0
C-terminus
uagpf_v2_unigene51642 uagpf v2.0 376
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
C-terminus
uagpf_v2_unigene51914 uagpf v2.0 698
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_974613.1| uncharacterized protein [Arabidopsis thaliana] emb|CAB36745.1| putative protein [Arabidopsis thaliana] emb|CAB79412.1| putative protein [Arabidopsis thaliana] gb|AAM62860.1| unknown [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene52099 uagpf v2.0 531
AutoFact: replication protein A 30kDa [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a 32 kda subunit 0.0
C-terminus
uagpf_v2_unigene52236 uagpf v2.0 291
AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iif subunit 0.0
C-terminus
uagpf_v2_unigene52331 uagpf v2.0 487
AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene52565 uagpf v2.0 240
AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
Internal
uagpf_v2_unigene52702 uagpf v2.0 429
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
Blast2go: transcription factor e2f 0.0
unknown
uagpf_v2_unigene53344 uagpf v2.0 403
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 2.0e-14
FL-Next: sp=Transcription factor E2FB; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor e2f 4.36704e-20
C-terminus
uagpf_v2_unigene53626 uagpf v2.0 474
AutoFact: Unassigned protein
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene53643 uagpf v2.0 636
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene53942 uagpf v2.0 435
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene54124 uagpf v2.0 364
AutoFact: RPA 32kDa [Pisum sativum] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a protein 2-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain