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Assembly Name: uagpf v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene42951 uagpf v2.0 374
AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cullin 3 0.0
Internal
uagpf_v2_unigene43280 uagpf v2.0 201
AutoFact: putative COP9 signalosome complex subunit 2 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene43512 uagpf v2.0 267
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene43536 uagpf v2.0 357
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene45258 uagpf v2.0 198
AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene45315 uagpf v2.0 220
AutoFact: Heat shock factor protein 7 n=1 Tax=Zea mays RepID=B6TJ68_MAIZE 0.0
Blast2go: heat shock factor protein 7 0.0
Coding
uagpf_v2_unigene46143 uagpf v2.0 416
AutoFact: casein kinase I-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene46526 uagpf v2.0 310
AutoFact: cullin-like protein1 [Pisum sativum] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.33622e-12
Internal
uagpf_v2_unigene46635 uagpf v2.0 234
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47216 uagpf v2.0 418
AutoFact: rve domain containing protein 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_024821 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene47887 uagpf v2.0 300
AutoFact: Cullin 1A n=2 Tax=Nicotiana tabacum RepID=Q711G8_TOBAC 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cullin-1-like isoform 1 8.44436e-20
C-terminus
uagpf_v2_unigene48461 uagpf v2.0 320
AutoFact: Strong similarity to the sucrose-phosphate synthase from Craterostigma plantagineum gb|Y11795 [Arabidopsis thaliana] 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sucrose-phosphate synthase 5.67942e-08
Internal
uagpf_v2_unigene48608 uagpf v2.0 268
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
Blast2go: btb poz domain-containing protein at1g30440-like 0.0
unknown
uagpf_v2_unigene49250 uagpf v2.0 157
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
Blast2go: telomere repeat binding factor 1 0.0
unknown
uagpf_v2_unigene49306 uagpf v2.0 381
AutoFact: RecName: Full=Heat shock factor protein HSF8; AltName: Full=Heat shock transcription factor 8; Short=HSTF 8; AltName: Full=Heat stress transcription factor emb|CAA47869.1| heat shock transcription factor 8 [Solanum peruvianum] 4.99997e-41
FL-Next: sp=Heat stress transcription factor A-1b; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: heat shock factor protein 0.0
Internal
uagpf_v2_unigene49781 uagpf v2.0 419
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 1.0e-25
Blast2go: histone h1-like protein 3.10277e-31
Coding
uagpf_v2_unigene49865 uagpf v2.0 655
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CRF1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar membrane-associated protein iml1 0.0
Putative C-terminus
uagpf_v2_unigene49927 uagpf v2.0 491
AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
C-terminus
uagpf_v2_unigene49938 uagpf v2.0 416
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 6.0e-18
Blast2go: atp synthase subunit a chloroplastic 5.02155e-22
unknown
uagpf_v2_unigene50201 uagpf v2.0 353
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
Blast2go: histone-like protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain