Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene40431 uagpf v2.0 414
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene40534 uagpf v2.0 301
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 8.0e-30
FL-Next: tr=Myosin class 11-2; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: myosin-like protein 8.12413e-35
Internal
uagpf_v2_unigene40558 uagpf v2.0 323
AutoFact: COP1 homolog [Solanum lycopersicum] 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-45
Putative C-terminus
uagpf_v2_unigene40561 uagpf v2.0 374
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Putative N-terminus
uagpf_v2_unigene40570 uagpf v2.0 322
AutoFact: PPR domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene40600 uagpf v2.0 293
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Coding
uagpf_v2_unigene40675 uagpf v2.0 372
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: sp=Potassium transporter 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium transporter 5 0.0
Internal
uagpf_v2_unigene40748 uagpf v2.0 293
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Internal
uagpf_v2_unigene40787 uagpf v2.0 407
AutoFact: Amino acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S5B3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: act domain-containing protein 0.0
Internal
uagpf_v2_unigene40844 uagpf v2.0 237
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 1.27329e-36
Internal
uagpf_v2_unigene40913 uagpf v2.0 359
AutoFact: Transmembrane amino acid transporter family protein [Arabidopsis thaliana] gb|AEE79297.1| Transmembrane amino acid transporter family protein [Arabidopsis thaliana] 4.0e-31
Blast2go: amino acid 8.77213e-43
unknown
uagpf_v2_unigene41025 uagpf v2.0 292
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U8_CYCRE 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 9.88294e-28
Internal
uagpf_v2_unigene41032 uagpf v2.0 403
AutoFact: Guanine nucleotide-exchange factor n=3 Tax=Arabidopsis RepID=F4IXW2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene41126 uagpf v2.0 287
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 3.935e-38
Internal
uagpf_v2_unigene41202 uagpf v2.0 390
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Zinc finger (C3HC4 type RING finger) family protein; Musa acuminata (Banana) (Musa cavendishii). 0.0
Blast2go: zinc finger (c3hc4-type ring finger) 0.0
Internal
uagpf_v2_unigene41233 uagpf v2.0 266
AutoFact: Vacuolar sorting protein 39 [Arabidopsis thaliana] gb|AAM20730.1| unknown protein [Arabidopsis thaliana] gb|AEE86679.1| Vacuolar sorting protein 39 [Arabidopsis thaliana] 0.0
Blast2go: vam6 vps39-like 0.0
Coding
uagpf_v2_unigene41237 uagpf v2.0 338
AutoFact: Gibberellin induced protein (Fragment) n=5 Tax=Sonneratia RepID=A9XNT2_9MYRT 3.0e-20
FL-Next: tr=Gasa5 like protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gibberellin induced protein 1.16866e-25
Putative Complete
uagpf_v2_unigene41392 uagpf v2.0 505
AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
FL-Next: Isoform 2 of Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 0.0
Blast2go: trehalose-phosphate synthase 0.0
Internal
uagpf_v2_unigene41433 uagpf v2.0 216
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: sp=Potassium transporter 5; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 5 0.0
Internal
uagpf_v2_unigene41464 uagpf v2.0 280
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain