Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene46374 uagpf v2.0 315
• AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GTP1_POPTR 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
Coding
uagpf_v2_unigene46539 uagpf v2.0 419
• AutoFact: Alpha-expansin 13, putative n=1 Tax=Ricinus communis RepID=B9SKR9_RICCO 0.0
• FL-Next: tr=Expansin 2; Cunninghamia lanceolata (China fir). 0.0
• Blast2go: alpha-expansin 13 0.0
Internal
uagpf_v2_unigene46593 uagpf v2.0 217
• AutoFact: 1,3-beta-glucan synthase, putative n=1 Tax=Ricinus communis RepID=B9SQ54_RICCO 0.0
• FL-Next: sp=Callose synthase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: callose synthase 0.0
Internal
uagpf_v2_unigene46981 uagpf v2.0 218
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 2.0e-30
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Blast2go: pol protein integrase region 2.85279e-40
Internal
uagpf_v2_unigene46986 uagpf v2.0 420
• AutoFact: Alpha-expansin (Fragment) n=4 Tax=Pseudotsuga RepID=C6F6F4_PSEMZ 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha-expansin 4.68544e-25
Putative C-terminus
uagpf_v2_unigene50486 uagpf v2.0 372
• AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Blast2go: gras family transcription factor 0.0
Internal
uagpf_v2_unigene50635 uagpf v2.0 194
• AutoFact: OSJNBa0085C10.29 protein n=1 Tax=Oryza sativa RepID=Q5JPW2_ORYSA 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 3.44207e-20
Putative Complete
uagpf_v2_unigene50790 uagpf v2.0 389
• AutoFact: fimbrin-like protein 2 [Arabidopsis thaliana] sp|Q9FKI0.1|FIMB2_ARATH RecName: Full=Fimbrin-like protein 2 dbj|BAB09267.1| fimbrin [Arabidopsis thaliana] gb|AAK76454.1| putative fimbrin protein [Arabidopsis thaliana] gb|AAN13139.1| putative fimbrin protei 0.0
• Blast2go: fimbrin-like protein 2-like 0.0
unknown
uagpf_v2_unigene50929 uagpf v2.0 251
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 4.00001e-40
• Blast2go: expansin 1 5.608e-42
unknown
uagpf_v2_unigene50952 uagpf v2.0 413
• AutoFact: chloroplast biotin carboxylase [Gossypium hirsutum] 0.0
• FL-Next: sp=Biotin carboxylase 1, chloroplastic; subsp. trichocarpa). 0.0
• Blast2go: biotin carboxylase precursor 0.0
Putative N-terminus
uagpf_v2_unigene51324 uagpf v2.0 384
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 3.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 5.9699e-35
N-terminus
uagpf_v2_unigene51659 uagpf v2.0 425
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: expansin 0.0
N-terminus
uagpf_v2_unigene52480 uagpf v2.0 332
• AutoFact: MtN3_slv domain containing protein 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bidirectional sugar transporter sweet4-like 0.0
Putative N-terminus
uagpf_v2_unigene53272 uagpf v2.0 482
• AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAD20090.1| putative endosomal protein [Arabidopsis thaliana] gb|AAL24256.1| At2g01970/F14H20.4 [Arabidopsis thaliana] dbj|BAE98629.1| putative endosomal protein [Arabidopsis thaliana] gb|AEC05528 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
uagpf_v2_unigene53615 uagpf v2.0 554
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: expansin os-expa2 0.0
C-terminus
uagpf_v2_unigene53838 uagpf v2.0 411
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Blast2go: expansin os-expa2 0.0
N-terminus
uagpf_v2_unigene54403 uagpf v2.0 382
• AutoFact: Clathrin assembly protein, putative n=1 Tax=Ricinus communis RepID=B9T128_RICCO 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene56001 uagpf v2.0 709
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
Putative Complete
uagpf_v2_unigene56002 uagpf v2.0 361
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 1.99965e-42
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
C-terminus
uagpf_v2_unigene56069 uagpf v2.0 446
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain