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Assembly Name: uagpf v2.0

Name: Aminoacyl-tRNA synthetase, class I, conserved site

Term: IPR001412  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4713 uagpf v2.0 515
AutoFact: Calmodulin-binding protein [Arabidopsis thaliana] dbj|BAB08793.1| calmodulin-binding protein [Arabidopsis thaliana] gb|AAL07138.1| putative calmodulin-binding protein [Arabidopsis thaliana] gb|AAM14373.1| putative calmodulin-binding protein [Arabidopsis t 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: calmodulin-binding protein 0.0
Internal
uagpf_v2_unigene4940 uagpf v2.0 1062
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
uagpf_v2_unigene5143 uagpf v2.0 979
AutoFact: PRP38 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: pre-mrna-splicing factor 38b 0.0
C-terminus
uagpf_v2_unigene5165 uagpf v2.0 397
AutoFact: Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE851 0.0
FL-Next: tr=Arginyl-tRNA synthetase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: arginyl-trna synthetase 0.0
Internal
uagpf_v2_unigene5207 uagpf v2.0 1398
AutoFact: transmembrane amino acid transporter-like protein [Arabidopsis thaliana] gb|AAK64155.1| unknown protein [Arabidopsis thaliana] gb|AAL85095.1| unknown protein [Arabidopsis thaliana] gb|AAD11993.2| expressed protein [Arabidopsis thaliana] gb|AEC09942.1| tra 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar amino acid transporter 1-like 0.0
Complete
uagpf_v2_unigene5434 uagpf v2.0 535
AutoFact: GAGA-binding transcriptional activator BBR/BPC6-like n=1 Tax=Vitis vinifera RepID=B2Z458_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic pentacysteine 4 0.0
N-terminus
uagpf_v2_unigene5459 uagpf v2.0 745
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: sp=Pumilio homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene5733 uagpf v2.0 396
AutoFact: isoleucyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE82867.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: isoleucyl-trna cytoplasmic-like 0.0
C-terminus
uagpf_v2_unigene5771 uagpf v2.0 707
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 1 2.38427e-37
Putative N-terminus
uagpf_v2_unigene5787 uagpf v2.0 684
AutoFact: Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE851 0.0
Blast2go: arginyl-trna synthetase 0.0
unknown
uagpf_v2_unigene5793 uagpf v2.0 661
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene5868 uagpf v2.0 1160
AutoFact: Protein SYM1, putative n=1 Tax=Ricinus communis RepID=B9SNC3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6111 uagpf v2.0 603
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase homolog 0.0
N-terminus
uagpf_v2_unigene6324 uagpf v2.0 832
AutoFact: 2-oxoacid-dependent dioxygenase n=2 Tax=Selaginella moellendorffii RepID=D8R3W5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-oxoacid-dependent dioxygenase 0.0
C-terminus
uagpf_v2_unigene6522 uagpf v2.0 619
AutoFact: SNARE associated Golgi protein family [Arabidopsis thaliana] gb|AAR92258.1| At1g03260 [Arabidopsis thaliana] gb|AAS47670.1| At1g03260 [Arabidopsis thaliana] gb|AEE27551.1| SNARE associated Golgi protein family [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tvp38 tmem64 family membrane protein slr0305-like 0.0
C-terminus
uagpf_v2_unigene6581 uagpf v2.0 418
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 1.96182e-44
FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene6610 uagpf v2.0 711
AutoFact: Salt tolerance protein 1 n=1 Tax=Beta vulgaris RepID=Q711N4_BETVU 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plasminogen activator inhibitor 1 rna-binding protein 1.88503e-28
Complete
uagpf_v2_unigene6724 uagpf v2.0 455
AutoFact: Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] dbj|BAF00863.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86755.1| Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] 0.0
FL-Next: sp=B3 domain-containing protein Os03g0184500; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
N-terminus
uagpf_v2_unigene6790 uagpf v2.0 1097
AutoFact: Serine/threonine-protein kinase n=1 Tax=Cucumis melo subsp. melo RepID=E5GB79_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Putative C-terminus
uagpf_v2_unigene6864 uagpf v2.0 546
AutoFact: Glutamyl-tRNA synthetase 1, 2, putative n=1 Tax=Ricinus communis RepID=B9T2L7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna synthetase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain