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Assembly Name: uagpf v2.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6188 uagpf v2.0 2688
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5A8_RICCO 0.0
FL-Next: sp=Probable inactive receptor kinase RLK902; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable inactive receptor kinase at5g58300-like 0.0
Complete
uagpf_v2_unigene6258 uagpf v2.0 498
AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs-lrr resistance protein 0.0
C-terminus
uagpf_v2_unigene6272 uagpf v2.0 787
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
uagpf_v2_unigene6296 uagpf v2.0 472
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J6_PINTA 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6538 uagpf v2.0 632
AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene6566 uagpf v2.0 581
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9R831_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 0.0
C-terminus
uagpf_v2_unigene6721 uagpf v2.0 873
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
Blast2go: f-box family protein 0.0
Putative coding
uagpf_v2_unigene6790 uagpf v2.0 1097
AutoFact: Serine/threonine-protein kinase n=1 Tax=Cucumis melo subsp. melo RepID=E5GB79_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Putative C-terminus
uagpf_v2_unigene6834 uagpf v2.0 636
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene6906 uagpf v2.0 1367
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
N-terminus
uagpf_v2_unigene6916 uagpf v2.0 461
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB02454.1| unnamed protein product [Arabidopsis thaliana] gb|AAU94380.1| At3g19300 [Arabidopsis thaliana] gb|AAV59270.1| At3g19300 [Arabidopsis thaliana] gb|AEE76221.1| protein kinase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g49730-like 0.0
Putative C-terminus
uagpf_v2_unigene6962 uagpf v2.0 417
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I8_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine rich repeat family expressed 0.0
Putative C-terminus
uagpf_v2_unigene6988 uagpf v2.0 557
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen activated protein kinase kinase kinase 0.0
Putative Complete
uagpf_v2_unigene7084 uagpf v2.0 789
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Putative Complete
uagpf_v2_unigene7088 uagpf v2.0 405
AutoFact: Extensin_2 multi-domain protein 7.0e-23
unknown
uagpf_v2_unigene7152 uagpf v2.0 790
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGH8.1|Y1634_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g63430; Flags: Precursor gb|ACN59263.1| leucine-rich repeat receptor-like 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase 0.0
N-terminus
uagpf_v2_unigene7285 uagpf v2.0 457
AutoFact: serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74) 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase gso2-like 8.7582e-36
Internal
uagpf_v2_unigene7431 uagpf v2.0 389
AutoFact: Receptor-like protein kinase 4 n=2 Tax=Arabidopsis RepID=F4JH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-locus lectin protein kinase family protein 0.0
Internal
uagpf_v2_unigene7432 uagpf v2.0 808
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene7467 uagpf v2.0 485
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I8_PINTA 0.0
Blast2go: leucine rich repeat-like protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain