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Assembly Name: uagpf v2.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5326 uagpf v2.0 857
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAM74505.1| AT3g15410/MJK13_7 [Arabidopsis thaliana] gb|AAN46812.1| At3g15410/MJK13_7 [Arabidopsis thaliana] gb|AEE75670.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene5386 uagpf v2.0 758
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
Blast2go: atp binding 0.0
unknown
uagpf_v2_unigene5468 uagpf v2.0 988
AutoFact: TIR1/AFB auxin receptor protein PintaAFB6 n=1 Tax=Pinus taeda RepID=C9EHT0_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB6; Pinus taeda (Loblolly pine). 0.0
Blast2go: transport inhibitor response 1 0.0
C-terminus
uagpf_v2_unigene5523 uagpf v2.0 616
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGH8.1|Y1634_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g63430; Flags: Precursor gb|ACN59263.1| leucine-rich repeat receptor-like 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase 0.0
Internal
uagpf_v2_unigene5545 uagpf v2.0 844
AutoFact: acidic leucine-rich nuclear phosphoprotein 32-related protein [Arabidopsis thaliana] sp|Q9SCQ7.1|AN32_ARATH RecName: Full=Acidic leucine-rich nuclear phosphoprotein 32-related protein; AltName: Full=ANP32/acidic nuclear phosphoprotein-like protein emb|CAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene5586 uagpf v2.0 943
AutoFact: Leucine-rich repeat protein n=1 Tax=x Citrofortunella microcarpa RepID=Q84N26_9ROSI 0.0
Blast2go: leucine-rich repeat protein 0.0
unknown
uagpf_v2_unigene5692 uagpf v2.0 701
AutoFact: Leucine Rich Repeat family protein n=28 Tax=Oryza RepID=Q2R2D5_ORYSJ 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase xa21 2.69671e-23
Internal
uagpf_v2_unigene5703 uagpf v2.0 758
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAN13089.1| unknown protein [Arabidopsis thaliana] gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=F-box-containing protein 1; Malus domestica (Apple) (Pyrus malus). 0.0
Blast2go: insulin-like growth factor-binding protein complex acid labile subunit-like 0.0
Putative C-terminus
uagpf_v2_unigene5720 uagpf v2.0 654
AutoFact: putative protein kinase [Oryza sativa Japonica Group] gb|AAV32131.1| putative systemin receptor SR160 [Oryza sativa Japonica Group] gb|EEE63733.1| hypothetical protein OsJ_18551 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probably inactive leucine-rich repeat receptor-like protein kinase at5g48380-like 0.0
C-terminus
uagpf_v2_unigene5769 uagpf v2.0 1139
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
uagpf_v2_unigene5793 uagpf v2.0 661
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene5857 uagpf v2.0 523
AutoFact: Calcineurin B-like protein 01 n=1 Tax=Selaginella moellendorffii RepID=C4P7X6_SELML 0.0
Blast2go: calcineurin b-like protein 4 0.0
unknown
uagpf_v2_unigene5858 uagpf v2.0 620
AutoFact: Leucine-rich repeat receptor protein kinase EXS, putative n=1 Tax=Ricinus communis RepID=B9RN04_RICCO 2.0e-22
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: leucine rich repeat receptor protein kinase 2 3.31871e-25
Internal
uagpf_v2_unigene5893 uagpf v2.0 290
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.73752e-17
Internal
uagpf_v2_unigene5907 uagpf v2.0 480
AutoFact: CLL4A clavata1-like receptor S/T protein kinase protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SDH6_PHYPA 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: extra sporogenous cells 0.0
Putative C-terminus
uagpf_v2_unigene5998 uagpf v2.0 493
AutoFact: TIR/P-loop/LRR n=1 Tax=Pinus taeda RepID=Q8L8J0_PINTA 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir p-loop lrr 5.9675e-36
Putative Complete
uagpf_v2_unigene6033 uagpf v2.0 1617
AutoFact: acidic leucine-rich nuclear phosphoprotein 32-related protein [Arabidopsis thaliana] sp|Q9SCQ7.1|AN32_ARATH RecName: Full=Acidic leucine-rich nuclear phosphoprotein 32-related protein; AltName: Full=ANP32/acidic nuclear phosphoprotein-like protein emb|CAB 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6055 uagpf v2.0 978
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
uagpf_v2_unigene6075 uagpf v2.0 447
AutoFact: Sucrose phosphate syntase, putative n=1 Tax=Ricinus communis RepID=B9RWD6_RICCO 0.0
unknown
uagpf_v2_unigene6137 uagpf v2.0 1219
AutoFact: leucine-rich repeat family protein [Arabidopsis thaliana] gb|AAC79105.1| putative leucine-rich repeat protein [Arabidopsis thaliana] emb|CAB77786.1| putative leucine-rich repeat protein [Arabidopsis thaliana] gb|ABE66040.1| leucine-rich repeat family prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat family protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain