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Assembly Name: uagpf v2.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4211 uagpf v2.0 640
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9S2F4_RICCO 0.0
FL-Next: sp=Serine/threonine-protein kinase BRI1-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-threonine protein plant- 0.0
Internal
uagpf_v2_unigene4225 uagpf v2.0 631
AutoFact: putative protein kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g04210 0.0
Putative N-terminus
uagpf_v2_unigene4232 uagpf v2.0 516
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAC09037.1| putative protein kinase [Arabidopsis thaliana] gb|AAT99800.1| At2g18890 [Arabidopsis thaliana] gb|AAU94416.1| At2g18890 [Arabidopsis thaliana] gb|AEC06821.1| protein kinase-like protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like serine threonine-protein kinase at5g57670-like 0.0
Internal
uagpf_v2_unigene4239 uagpf v2.0 933
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAM13067.1| unknown protein [Arabidopsis thaliana] gb|AAM91174.1| unknown protein [Arabidopsis thaliana] gb|AED91220.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr repeats and ubiquitin-like domain-containing protein at2g30105-like 0.0
Putative Complete
uagpf_v2_unigene4265 uagpf v2.0 474
AutoFact: NBS-LRR disease resistance protein homologue [Hordeum vulgare] 2.0e-13
Blast2go: protein 1.41426e-18
unknown
uagpf_v2_unigene4422 uagpf v2.0 484
AutoFact: Sucrose phosphate syntase, putative n=1 Tax=Ricinus communis RepID=B9RWD6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene4530 uagpf v2.0 439
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SB23_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4555 uagpf v2.0 839
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene4604 uagpf v2.0 500
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAO24571.1| At5g19680 [Arabidopsis thaliana] dbj|BAF00080.1| hypothetical protein [Arabidopsis thaliana] gb|AED92737.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene4712 uagpf v2.0 402
AutoFact: Extensin_2 multi-domain protein 1.0e-13
unknown
uagpf_v2_unigene4775 uagpf v2.0 446
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
uagpf_v2_unigene4782 uagpf v2.0 735
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
Blast2go: ring-h2 finger protein atl13 0.0
Coding
uagpf_v2_unigene4814 uagpf v2.0 709
AutoFact: Di-glucose binding protein with Leucine-rich repeat domain [Arabidopsis thaliana] gb|AEE30643.1| Di-glucose binding protein with Leucine-rich repeat domain [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Bruguiera gymnorhiza. 0.0
C-terminus
uagpf_v2_unigene4894 uagpf v2.0 577
AutoFact: Somatic embryogenesis receptor kinase-like protein 2 n=2 Tax=Papilionoideae RepID=E2IXG6_MEDTR 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat receptor-like kinase 1.39817e-37
N-terminus
uagpf_v2_unigene4898 uagpf v2.0 541
AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO 2.0e-24
Blast2go: n-glycosylase dna lyase 7.42815e-29
Putative coding
uagpf_v2_unigene4931 uagpf v2.0 603
AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
unknown
uagpf_v2_unigene4940 uagpf v2.0 1062
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
uagpf_v2_unigene5046 uagpf v2.0 881
AutoFact: tubulin folding cofactor E [Arabidopsis thaliana] gb|AAM63142.1| unknown [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tubulin-specific chaperone e 0.0
C-terminus
uagpf_v2_unigene5091 uagpf v2.0 628
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 4.0e-18
FL-Next: sp=Protein STRUBBELIG-RECEPTOR FAMILY 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
uagpf_v2_unigene5264 uagpf v2.0 437
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain