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Assembly Name: uagpf v2.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3199 uagpf v2.0 538
AutoFact: SET domain-containing protein (ISS) [Ostreococcus tauri] emb|CAL55747.1| SET domain-containing protein (ISS) [Ostreococcus tauri] 0.0
Blast2go: probable histone-lysine n-methyltransferase atxr3-like 0.0
Putative coding
uagpf_v2_unigene3232 uagpf v2.0 334
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9R6R4_RICCO 0.0
FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor protein kinase clavata1 0.0
Internal
uagpf_v2_unigene3235 uagpf v2.0 935
AutoFact: Receptor-like protein kinase HSL1 n=2 Tax=Arabidopsis RepID=HSL1_ARATH 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase hsl1 0.0
Internal
uagpf_v2_unigene3251 uagpf v2.0 392
AutoFact: TIR/P-loop/LRR n=1 Tax=Pinus taeda RepID=Q8L8J0_PINTA 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir p-loop lrr 6.93676e-29
Complete
uagpf_v2_unigene3320 uagpf v2.0 411
AutoFact: cell division protease ftsH-11 [Arabidopsis thaliana] sp|Q9FGM0.1|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj|BAB08420.1| cell division protein FtsH protease-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
C-terminus
uagpf_v2_unigene3338 uagpf v2.0 567
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 0.0
Internal
uagpf_v2_unigene3411 uagpf v2.0 415
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9RH25_RICCO 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.10698e-28
Putative N-terminus
uagpf_v2_unigene3431 uagpf v2.0 476
AutoFact: Leucine-rich repeat family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GC33_CUCME 0.0
Blast2go: leucine-rich repeat family protein 0.0
unknown
uagpf_v2_unigene3479 uagpf v2.0 583
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
Blast2go: receptor-like protein kinase 0.0
Coding
uagpf_v2_unigene3514 uagpf v2.0 294
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Putative C-terminus
uagpf_v2_unigene3570 uagpf v2.0 1075
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RCS2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene3571 uagpf v2.0 560
AutoFact: leucine-rich repeats-ribonuclease inhibitor domain-containing protein [Arabidopsis thaliana] gb|AAG52036.1|AC011914_6 unknown protein; 64153-65607 [Arabidopsis thaliana] gb|AAK32784.1|AF361616_1 At1g68780/F14K14_11 [Arabidopsis thaliana] gb|AAU90067.1| At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: piriformospora indica-insensitive protein 2-like 0.0
C-terminus
uagpf_v2_unigene3712 uagpf v2.0 762
AutoFact: CC-NBS-LRR resistance-like protein [Pinus lambertiana] 2.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 8.36575e-43
Internal
uagpf_v2_unigene3751 uagpf v2.0 1146
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T7R3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase mrh1-like 0.0
C-terminus
uagpf_v2_unigene3823 uagpf v2.0 969
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene3824 uagpf v2.0 400
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
Putative coding
uagpf_v2_unigene4097 uagpf v2.0 1189
AutoFact: leucine-rich receptor-like protein kinase [Arabidopsis thaliana] gb|AEE84378.1| leucine-rich receptor-like protein kinase [Arabidopsis thaliana] 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable inactive receptor kinase at5g10020-like 0.0
Putative N-terminus
uagpf_v2_unigene4102 uagpf v2.0 698
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
Putative N-terminus
uagpf_v2_unigene4107 uagpf v2.0 979
AutoFact: protein kinase-like protein [Arabidopsis thaliana] sp|O64639.1|Y2559_ARATH RecName: Full=Receptor-like serine/threonine-protein kinase At2g45590 gb|AAC06160.1| putative protein kinase [Arabidopsis thaliana] gb|AAO22616.1| putative protein kinase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor-like serine threonine-protein kinase at2g45590-like 0.0
C-terminus
uagpf_v2_unigene4139 uagpf v2.0 574
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
Blast2go: f-box family protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain