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Assembly Name: uagpf v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene49277 uagpf v2.0 248
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RPC6_RICCO 1.0e-13
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: leunig 3.25626e-16
Putative C-terminus
uagpf_v2_unigene49409 uagpf v2.0 335
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.17109e-40
Internal
uagpf_v2_unigene49514 uagpf v2.0 438
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 3.31718e-37
N-terminus
uagpf_v2_unigene49635 uagpf v2.0 448
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alliin lyase 0.0
C-terminus
uagpf_v2_unigene49796 uagpf v2.0 677
AutoFact: F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] sp|Q9SV01.2|FBW4_ARATH RecName: Full=F-box/WD-40 repeat-containing protein At3g52030 gb|AEE78876.1| F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box wd-40 repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene49867 uagpf v2.0 477
AutoFact: putative inositol polyphosphate 5-phosphatase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Type I inositol-1,4,5-trisphosphate 5-phosphatase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: type i inositol- -trisphosphate 5-phosphatase 11-like 0.0
C-terminus
uagpf_v2_unigene49912 uagpf v2.0 540
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
N-terminus
uagpf_v2_unigene49924 uagpf v2.0 510
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene50004 uagpf v2.0 425
AutoFact: WD repeat-containing protein 5 [Danio rerio] gb|AAH52124.1| Wdr5 protein [Danio rerio] gb|AAH66729.1| Wdr5 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
C-terminus
uagpf_v2_unigene50010 uagpf v2.0 720
AutoFact: Os06g0186300 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0DE01_ORYSJ 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat receptor-like serine threonine-protein kinase at2g24130-like 2.51874e-30
Internal
uagpf_v2_unigene50052 uagpf v2.0 303
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
Internal
uagpf_v2_unigene50063 uagpf v2.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene50106 uagpf v2.0 502
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene50175 uagpf v2.0 352
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene50185 uagpf v2.0 344
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
Blast2go: cellulose synthase 0.0
unknown
uagpf_v2_unigene50186 uagpf v2.0 379
AutoFact: Guanine nucleotide-binding protein subunit beta-1 n=9 Tax=core eudicotyledons RepID=GBB1_TOBAC 0.0
Blast2go: g protein beta subunit 0.0
Putative coding
uagpf_v2_unigene50294 uagpf v2.0 502
AutoFact: protein kinase APK1B [Arabidopsis thaliana] gb|AEC08191.1| protein kinase APK1B [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
uagpf_v2_unigene50430 uagpf v2.0 233
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610 dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AEE75843.1| pentatricope 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene50466 uagpf v2.0 235
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene50506 uagpf v2.0 488
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21705, mitochondrial; Flags: Precursor gb|AAO42004.1| unknown protein [Arabidopsis thaliana] gb|AAO505 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain