Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene47949 uagpf v2.0 169
AutoFact: zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] dbj|BAB11046.1| unnamed protein product [Arabidopsis thaliana] gb|AED96154.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
unknown
uagpf_v2_unigene48040 uagpf v2.0 402
AutoFact: Carotenoid epsilon-ring hydroxylase n=3 Tax=Arabidopsis RepID=Q6TBX7_ARATH 0.0
Blast2go: carotene epsilon- chloroplastic-like 0.0
Coding
uagpf_v2_unigene48158 uagpf v2.0 326
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at3g23330-like 1.67505e-17
C-terminus
uagpf_v2_unigene48184 uagpf v2.0 283
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
uagpf_v2_unigene48218 uagpf v2.0 269
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GJS6_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Internal
uagpf_v2_unigene48367 uagpf v2.0 258
AutoFact: Bromodomain and WD repeat domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNP7_PHYPA 0.0
FL-Next: tr=Bromodomain and WD repeat domain-containing protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd40 yvtn repeat and bromo-wdr9-i-like domain-containing protein 0.0
Internal
uagpf_v2_unigene48380 uagpf v2.0 387
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene48442 uagpf v2.0 223
AutoFact: Neurobeachin, putative n=1 Tax=Ricinus communis RepID=B9RZY6_RICCO 0.0
FL-Next: tr=BWF1-like protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable inactive serine threonine-protein kinase lvsg-like 0.0
Internal
uagpf_v2_unigene48504 uagpf v2.0 295
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: periodic tryptophan protein 2 0.0
Internal
uagpf_v2_unigene48643 uagpf v2.0 336
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.66547e-34
C-terminus
uagpf_v2_unigene48647 uagpf v2.0 324
AutoFact: Putative 97B2-like cytochrome P450 n=1 Tax=Ginkgo biloba RepID=Q6J4G9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
uagpf_v2_unigene48656 uagpf v2.0 421
AutoFact: cellulose synthase 5 [Physcomitrella patens] 2.0e-40
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene48808 uagpf v2.0 328
AutoFact: glycine-rich protein 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.00145e-24
Internal
uagpf_v2_unigene48822 uagpf v2.0 332
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 3-like 0.0
Putative C-terminus
uagpf_v2_unigene48916 uagpf v2.0 197
AutoFact: OSJNBa0091C07.7 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XK57_ORYSJ 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.40075e-17
Internal
uagpf_v2_unigene48929 uagpf v2.0 273
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1J5_RICCO 0.0
Blast2go: nucleotide binding 0.0
Putative coding
uagpf_v2_unigene49102 uagpf v2.0 222
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK92820.1| unknown protein [Arabidopsis thaliana] gb|AAL08286.1| AT4g18900/F13C5_70 [Arabidopsis thaliana] gb|AAM44990.1| unknown protein [Arabidopsis thaliana] gb|AEE84104.1| transducin 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
N-terminus
uagpf_v2_unigene49118 uagpf v2.0 210
AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
Internal
uagpf_v2_unigene49235 uagpf v2.0 418
AutoFact: Protein kinase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
uagpf_v2_unigene49274 uagpf v2.0 270
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 7.0e-12
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: bromodomain and wd repeat domain-containing protein 6.97289e-14
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain