Sustainpine_db
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Assembly Name: uagpf v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene8092 uagpf v2.0 796
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana] gb|AEE76041.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 66 kda stress protein 0.0
N-terminus
uagpf_v2_unigene8107 uagpf v2.0 374
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Putative coding
uagpf_v2_unigene8115 uagpf v2.0 728
AutoFact: putative CTP synthase [Arabidopsis thaliana] gb|AAM98192.1| CTP synthase-like protein [Arabidopsis thaliana] gb|AEE82126.1| putative CTP synthase [Arabidopsis thaliana] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctp synthase 0.0
Putative N-terminus
uagpf_v2_unigene8116 uagpf v2.0 348
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.96182e-44
Internal
uagpf_v2_unigene8171 uagpf v2.0 623
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene8173 uagpf v2.0 893
AutoFact: acetolactate synthase, small subunit, putative [Oryza sativa Japonica Group] gb|ABA92419.1| acetolactate synthase small subunit, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Acetolactate synthase small subunit; Cyanidium caldarium. Plastid; Chloroplast. 0.0
Blast2go: acetolactate synthase small subunit 0.0
N-terminus
uagpf_v2_unigene8206 uagpf v2.0 833
AutoFact: protein serine/threonine kinase [Lophopyrum elongatum] gb|AAK11674.1|AF339747_1 protein kinase [Lophopyrum elongatum] 0.0
Blast2go: protein kinase chloroplast 0.0
unknown
uagpf_v2_unigene8243 uagpf v2.0 547
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Internal
uagpf_v2_unigene8294 uagpf v2.0 418
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK32933.1|AF367346_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAL16252.1|AF428322_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAD21755.1| putative WD-40 repeat protein [Arabidopsis thaliana] 0.0
Blast2go: wd repeat-containing protein 70-like 0.0
Putative coding
uagpf_v2_unigene8308 uagpf v2.0 984
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S6L1_RICCO 0.0
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at5g21040-like protein 0.0
C-terminus
uagpf_v2_unigene8317 uagpf v2.0 324
AutoFact: Unassigned protein
Blast2go: vascular protein 0.0
Coding
uagpf_v2_unigene8333 uagpf v2.0 292
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial editing factor 22 1.32941e-21
C-terminus
uagpf_v2_unigene8336 uagpf v2.0 683
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8390 uagpf v2.0 861
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
N-terminus
uagpf_v2_unigene8423 uagpf v2.0 458
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
Putative coding
uagpf_v2_unigene8471 uagpf v2.0 419
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
uagpf_v2_unigene8489 uagpf v2.0 552
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001190666.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAM20586.1| putative WD-repeat protein [Arabidopsis thaliana] gb|AAN15676.1| putative WD-repeat protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene8493 uagpf v2.0 1922
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Os08g0108200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene8642 uagpf v2.0 577
AutoFact: Tetraspanin family protein [Arabidopsis thaliana] dbj|BAB08914.1| senescence-associated protein 5-like protein [Arabidopsis thaliana] gb|AAV85676.1| At5g46700 [Arabidopsis thaliana] dbj|BAE98437.1| senescence-associated protein 5-like protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: senescence-associated protein 5 0.0
N-terminus
uagpf_v2_unigene8665 uagpf v2.0 1384
AutoFact: putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] emb|CAH09301.1| putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] 0.0
FL-Next: sp=4-alpha-glucanotransferase DPE2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 4-alpha-glucanotransferase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain