Sustainpine_db
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Assembly Name: uagpf v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene7473 uagpf v2.0 814
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor-like serine threonine-protein kinase ale2-like 0.0
Internal
uagpf_v2_unigene7487 uagpf v2.0 398
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.56398e-40
Internal
uagpf_v2_unigene7536 uagpf v2.0 428
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene7542 uagpf v2.0 973
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAC67324.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAM13108.1| similar to axi 1 protein [Arabidopsis thaliana] gb|AAM91218.1| similar to axi 1 protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
C-terminus
uagpf_v2_unigene7571 uagpf v2.0 644
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7581 uagpf v2.0 545
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=A9NUR2_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 8-like 0.0
C-terminus
uagpf_v2_unigene7583 uagpf v2.0 475
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein phosphatase 0.0
Internal
uagpf_v2_unigene7655 uagpf v2.0 635
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Putative N-terminus
uagpf_v2_unigene7730 uagpf v2.0 411
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AEC06823.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin family protein 0.0
Internal
uagpf_v2_unigene7817 uagpf v2.0 446
AutoFact: PREDICTED: WD repeat-containing protein 18-like [Monodelphis domestica] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 5.98843e-26
Putative N-terminus
uagpf_v2_unigene7842 uagpf v2.0 385
AutoFact: EST1080338 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWACS91 3' end, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine protein methyltransferase 1 homolog 0.0
N-terminus
uagpf_v2_unigene7862 uagpf v2.0 1462
AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein transport protein sec31 0.0
Putative C-terminus
uagpf_v2_unigene7868 uagpf v2.0 318
AutoFact: Leucine-rich repeat resistance protein-like protein n=1 Tax=Gossypium hirsutum RepID=Q93X72_GOSHI 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor protein kinase 1.35253e-09
Internal
uagpf_v2_unigene7871 uagpf v2.0 1036
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RN12_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane associated protein phosphatase 2c 0.0
Putative C-terminus
uagpf_v2_unigene7883 uagpf v2.0 496
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Internal
uagpf_v2_unigene7918 uagpf v2.0 445
AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7932 uagpf v2.0 382
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
uagpf_v2_unigene7940 uagpf v2.0 510
AutoFact: switch 2 [Arabidopsis thaliana] gb|AEE27606.1| switch 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 super family 0.0
Internal
uagpf_v2_unigene8005 uagpf v2.0 1031
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene8014 uagpf v2.0 471
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTB5_RICCO 5.0e-18
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nucleotide binding 3.40779e-20
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain