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Assembly Name: uagpf v2.0

Name: Cystathionine beta-synthase, core

Term: IPR000644  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37969 uagpf v2.0 422
AutoFact: RecName: Full=tRNA wybutosine-synthesizing protein 1 homolog gb|AAN65027.1| putative oxidoreductase [Oryza sativa Japonica Group] gb|ABF99122.1| radical S-adenosyl methionine and flavodoxin domains 1, isoform 1, putative, expressed [Oryza sativa Japonica 0.0
FL-Next: Isoform 2 of tRNA wybutosine-synthesizing protein 1 homolog OS=Oryza sativa subsp. japonica GN=TYW1 0.0
Blast2go: trna wybutosine-synthesizing protein 1 homolog 0.0
Internal
uagpf_v2_unigene38586 uagpf v2.0 399
AutoFact: Coiled-coil domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SCZ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coiled-coil domain-containing protein 55 0.0
N-terminus
uagpf_v2_unigene39220 uagpf v2.0 315
AutoFact: AAA-type ATPase-like protein n=3 Tax=Arabidopsis RepID=O64728_ARATH 9.94922e-44
Blast2go: aaa-type atpase-like protein 0.0
Putative coding
uagpf_v2_unigene39240 uagpf v2.0 440
AutoFact: CBS; Cl- channel, voltage gated; Twin-arginine translocation pathway signal [Medicago truncatula] 0.0
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 0.0
Putative N-terminus
uagpf_v2_unigene39640 uagpf v2.0 251
AutoFact: cystathionine beta-synthase domain-containing protein [Arabidopsis thaliana] sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic; AltName: Full=CBS domain-containing protein 2; Short=AtCDCP2; AltName: Full=Protein LOSS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbs domain-containing protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene40119 uagpf v2.0 388
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] gb|AED96402.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene40438 uagpf v2.0 260
AutoFact: sugar isomerase domain-containing protein [Arabidopsis thaliana] emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana] dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana] gb|AEE79267.1| sugar isomerase d 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene41188 uagpf v2.0 438
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
FL-Next: Isoform 2 of Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F 0.0
Blast2go: chloride channel protein clc-f-like 0.0
Internal
uagpf_v2_unigene41289 uagpf v2.0 480
AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 0.0
Internal
uagpf_v2_unigene42570 uagpf v2.0 315
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
FL-Next: sp=Chloride channel protein CLC-f; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel protein clc-f-like 0.0
Internal
uagpf_v2_unigene43155 uagpf v2.0 272
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S048_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication factor c dna polymerase iii gamma-tau 0.0
Internal
uagpf_v2_unigene43344 uagpf v2.0 463
AutoFact: Magnesium and cobalt efflux protein corC, putative n=1 Tax=Ricinus communis RepID=B9T467_RICCO 0.0
FL-Next: sp=DUF21 domain-containing protein At1g55930, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene44853 uagpf v2.0 368
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: sp=CBS domain-containing protein CBSCBSPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene45914 uagpf v2.0 224
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: sp=CBS domain-containing protein CBSCBSPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene45958 uagpf v2.0 400
AutoFact: sugar isomerase domain-containing protein [Arabidopsis thaliana] emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana] dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana] gb|AEE79267.1| sugar isomerase d 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene49557 uagpf v2.0 365
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: sp=CBS domain-containing protein CBSCBSPB3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cbs domain-containing protein cbscbspb3-like 0.0
Internal
uagpf_v2_unigene50152 uagpf v2.0 365
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
Blast2go: cbs domain-containing protein cbscbspb3-like 0.0
unknown
uagpf_v2_unigene50287 uagpf v2.0 443
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] sp|Q8GZA4.1|CBSX6_ARATH RecName: Full=CBS domain-containing protein CBSX6 dbj|BAC41791.1| unknown protein [Arabidopsis thaliana] gb|AEE34358.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbs domain-containing protein cbsx6-like 0.0
Putative N-terminus
uagpf_v2_unigene50509 uagpf v2.0 359
AutoFact: Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] gb|AEE34977.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
Internal
uagpf_v2_unigene50523 uagpf v2.0 289
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: duf21 domain-containing protein at4g14240-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain