Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Cystathionine beta-synthase, core

Term: IPR000644  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27673 uagpf v2.0 426
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: duf21 domain-containing protein at4g14240-like 0.0
unknown
uagpf_v2_unigene28633 uagpf v2.0 557
AutoFact: DUF21 domain containing protein 1.0e-35
FL-Next: sp=DUF21 domain-containing protein At5g52790; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at2g14520-like 0.0
Putative N-terminus
uagpf_v2_unigene30251 uagpf v2.0 210
AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
Blast2go: cl-channel clc-7 0.0
unknown
uagpf_v2_unigene30478 uagpf v2.0 357
AutoFact: DUF248 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
uagpf_v2_unigene31742 uagpf v2.0 364
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloride channel protein clc-f 2.8686e-15
Internal
uagpf_v2_unigene31768 uagpf v2.0 491
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
N-terminus
uagpf_v2_unigene32142 uagpf v2.0 531
AutoFact: sucrose nonfermenting 4-like protein [Arabidopsis thaliana] gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] gb|AEE28383.1| sucr 0.0
Blast2go: sucrose nonfermenting 4-like isoform 1 0.0
unknown
uagpf_v2_unigene32186 uagpf v2.0 633
AutoFact: CBS domain-containing protein [Solenostemon scutellarioides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbs domain protein 0.0
C-terminus
uagpf_v2_unigene34255 uagpf v2.0 397
AutoFact: sugar isomerase domain-containing protein [Arabidopsis thaliana] emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana] dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana] gb|AEE79267.1| sugar isomerase d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene34855 uagpf v2.0 108
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
Blast2go: cbs domain-containing protein cbscbspb3-like 0.0
unknown
uagpf_v2_unigene35136 uagpf v2.0 206
AutoFact: Cl-channel clc-7 (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HV75_POPTR 0.0
Blast2go: chloride channel protein clc-d 0.0
unknown
uagpf_v2_unigene35276 uagpf v2.0 310
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
Blast2go: atp binding 0.0
Coding
uagpf_v2_unigene35571 uagpf v2.0 176
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative DUF21 domain-containing protein At1g03270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at4g14240-like 0.0
Internal
uagpf_v2_unigene36606 uagpf v2.0 501
AutoFact: cystathionine beta-synthase domain-containing protein [Arabidopsis thaliana] sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic; AltName: Full=CBS domain-containing protein 2; Short=AtCDCP2; AltName: Full=Protein LOSS 0.0
Blast2go: cbs domain-containing protein chloroplastic-like 0.0
unknown
uagpf_v2_unigene36630 uagpf v2.0 289
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEC06308.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 4.0e-05
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: hypothetical protein SELMODRAFT_76682 [Selaginella moellendorffii] 3.2212e-08
N-terminus
uagpf_v2_unigene37148 uagpf v2.0 480
AutoFact: sucrose nonfermenting 4-like protein [Arabidopsis thaliana] gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] gb|AEE28383.1| sucr 0.0
FL-Next: Isoform 2 of Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana GN=SNF4 0.0
Blast2go: sucrose nonfermenting 4-like isoform 1 0.0
N-terminus
uagpf_v2_unigene37232 uagpf v2.0 416
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] sp|Q8GZA4.1|CBSX6_ARATH RecName: Full=CBS domain-containing protein CBSX6 dbj|BAC41791.1| unknown protein [Arabidopsis thaliana] gb|AEE34358.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbs domain-containing protein cbsx6-like 0.0
C-terminus
uagpf_v2_unigene37532 uagpf v2.0 523
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
Blast2go: chloride channel protein clc-f-like 0.0
Putative coding
uagpf_v2_unigene37643 uagpf v2.0 461
AutoFact: AMP-activated protein kinase, gamma regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RAG9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
N-terminus
uagpf_v2_unigene37802 uagpf v2.0 545
AutoFact: sucrose nonfermenting 4-like protein [Arabidopsis thaliana] gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] gb|AEE28383.1| sucr 0.0
FL-Next: sp=Sucrose nonfermenting 4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sucrose nonfermenting 4-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain