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Assembly Name: uagpf v2.0

Name: Serine hydroxymethyltransferase

Term: IPR001085  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1055 uagpf v2.0 1610
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
C-terminus
uagpf_v2_unigene2774 uagpf v2.0 484
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
Blast2go: tga transcription factor 0.0
Coding
uagpf_v2_unigene3246 uagpf v2.0 1732
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Complete
uagpf_v2_unigene4003 uagpf v2.0 617
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fyve finger-containing phosphoinositide 0.0
C-terminus
uagpf_v2_unigene4116 uagpf v2.0 949
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 3 0.0
Putative N-terminus
uagpf_v2_unigene4676 uagpf v2.0 754
AutoFact: Serine hydroxymethyltransferase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SZT0_VITVI 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Putative coding
uagpf_v2_unigene8514 uagpf v2.0 581
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] dbj|BAE99133.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86194.1| 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 1-phosphatidylinositol-3-phosphate 5-kinase 0.0
C-terminus
uagpf_v2_unigene11138 uagpf v2.0 389
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
N-terminus
uagpf_v2_unigene13622 uagpf v2.0 897
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Blast2go: transcription factor hbp-1b 0.0
C-terminus
uagpf_v2_unigene14436 uagpf v2.0 878
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: tga transcription factor 0.0
C-terminus
uagpf_v2_unigene18416 uagpf v2.0 938
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 3 0.0
C-terminus
uagpf_v2_unigene18790 uagpf v2.0 2165
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Complete
uagpf_v2_unigene19093 uagpf v2.0 779
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine hydroxymethyltransferase 0.0
C-terminus
uagpf_v2_unigene25215 uagpf v2.0 441
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor hbp-1b 0.0
Internal
uagpf_v2_unigene25602 uagpf v2.0 345
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Blast2go: tga transcription factor 0.0
Internal
uagpf_v2_unigene28275 uagpf v2.0 369
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 0.0
Blast2go: fyve finger-containing phosphoinositide 0.0
unknown
uagpf_v2_unigene29076 uagpf v2.0 272
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
Blast2go: tga transcription factor 0.0
unknown
uagpf_v2_unigene29080 uagpf v2.0 462
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 0.0
Blast2go: fyve finger-containing phosphoinositide 0.0
unknown
uagpf_v2_unigene29604 uagpf v2.0 479
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 1.0e-11
Blast2go: serine hydroxymethyltransferase 2 4.10488e-13
unknown
uagpf_v2_unigene29735 uagpf v2.0 193
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
Blast2go: tga transcription factor 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain