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Assembly Name: uagpf v2.0

Name: RmlC-like jelly roll fold

Term: IPR014710  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1538 uagpf v2.0 549
AutoFact: putative cyclic nucleotide-regulated ion channel protein [Arabidopsis thaliana] 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
unknown
uagpf_v2_unigene1565 uagpf v2.0 888
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] emb|CAB40130.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] dbj|BAB08864.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] gb|AED96975. 0.0
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
Internal
uagpf_v2_unigene1622 uagpf v2.0 489
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9SJA4.2|CNG14_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 14; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 14 dbj|BAF00079.1| putative cyclic nucleoti 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
Putative coding
uagpf_v2_unigene2674 uagpf v2.0 1241
AutoFact: palmitoyl-CoA hydrolase [Arabidopsis thaliana] gb|AEE27325.1| palmitoyl-CoA hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-coenzyme a thioesterase 8-like 0.0
C-terminus
uagpf_v2_unigene2706 uagpf v2.0 660
AutoFact: cupin 2 domain-containing protein [Nostoc punctiforme PCC 73102] gb|ACC80140.1| Cupin 2, conserved barrel domain protein [Nostoc punctiforme PCC 73102] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cupin 2 conserved barrel domain protein 0.0
C-terminus
uagpf_v2_unigene3043 uagpf v2.0 357
AutoFact: cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana] sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 1; Short=AtCNGC1; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 1 gb|AAK43954.1|AF370139_1 putat 0.0
Blast2go: cyclic nucleotide gated channel 0.0
unknown
uagpf_v2_unigene3183 uagpf v2.0 588
AutoFact: 5-formyltetrahydrofolate cyclo-ligase-like protein n=4 Tax=Arabidopsis RepID=Q8L539_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: 5-formyltetrahydrofolate cyclo-ligase 0.0
Putative N-terminus
uagpf_v2_unigene3866 uagpf v2.0 623
AutoFact: palmitoyl-CoA hydrolase [Arabidopsis thaliana] gb|AEE27325.1| palmitoyl-CoA hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-coenzyme a thioesterase 8-like 0.0
N-terminus
uagpf_v2_unigene4547 uagpf v2.0 838
AutoFact: NXRV075_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV075_D04 5' similar to Arabidopsis thaliana sequence At1g37110 see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_011062 [Vitis vinifera] 0.0
Putative N-terminus
uagpf_v2_unigene4572 uagpf v2.0 1322
AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
FL-Next: tr=mRNA, clone: RTFL01-03-G21; Thellungiella halophila (Salt cress). 0.0
Blast2go: ureidoglycine aminohydrolase 0.0
C-terminus
uagpf_v2_unigene4700 uagpf v2.0 1059
AutoFact: Mannose-6-phosphate isomerase n=1 Tax=Picea sitchensis RepID=B8LLA2_PICSI 0.0
FL-Next: sp=Mannose-6-phosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mannose-6-phosphate isomerase-like 0.0
C-terminus
uagpf_v2_unigene6007 uagpf v2.0 1329
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9STR6_RICCO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
C-terminus
uagpf_v2_unigene6063 uagpf v2.0 1767
AutoFact: Nutrient reservoir, putative n=1 Tax=Ricinus communis RepID=B9SYN6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutelin type-a 0.0
Complete
uagpf_v2_unigene6906 uagpf v2.0 1367
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
N-terminus
uagpf_v2_unigene7806 uagpf v2.0 332
AutoFact: Vicilin-like storage protein n=2 Tax=Picea glauca RepID=Q40844_PICGL 3.0e-36
FL-Next: tr=Vicilin-like storage protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: beta-conglycinin beta subunit 7.00649e-45
Internal
uagpf_v2_unigene7934 uagpf v2.0 1152
AutoFact: Rhicadhesin receptor precursor, putative (EC:1.15.1.1) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: germin-like protein subfamily 3 member 2-like 0.0
Complete
uagpf_v2_unigene8331 uagpf v2.0 403
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: germin-like protein 2-1-like 0.0
Putative N-terminus
uagpf_v2_unigene10017 uagpf v2.0 434
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 0.0
Internal
uagpf_v2_unigene10177 uagpf v2.0 443
AutoFact: cupin 2 domain-containing protein [Nostoc punctiforme PCC 73102] gb|ACC80140.1| Cupin 2, conserved barrel domain protein [Nostoc punctiforme PCC 73102] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cupin 2 conserved barrel domain protein 0.0
N-terminus
uagpf_v2_unigene11423 uagpf v2.0 523
AutoFact: plastid transcriptionally active 18 [Arabidopsis thaliana] gb|AAD15387.1| hypothetical protein [Arabidopsis thaliana] dbj|BAC42256.1| unknown protein [Arabidopsis thaliana] gb|AAO50696.1| unknown protein [Arabidopsis thaliana] gb|AEC08646.1| plastid trans 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: like cupin-like protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain