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Assembly Name: uagpf v2.0

Name: RNA polymerase Rpb7, N-terminal

Term: IPR005576  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene2584 uagpf v2.0 487
• AutoFact: lectin-like receptor kinase 7;1 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
uagpf_v2_unigene3772 uagpf v2.0 677
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
uagpf_v2_unigene6061 uagpf v2.0 562
• AutoFact: RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gb|AAN13199.1| putative RNA polymerase [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene11404 uagpf v2.0 617
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
C-terminus
uagpf_v2_unigene13418 uagpf v2.0 506
• AutoFact: RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gb|AAN13199.1| putative RNA polymerase [Ara 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene13916 uagpf v2.0 462
• AutoFact: DNA-directed RNA polymerase [Arabidopsis thaliana] ref|NP_974148.1| DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAN12946.1| unknown protein [Arabidopsis thaliana] gb|AEE35743.1| DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AEE35744.1| D 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerase 0.0
Putative N-terminus
uagpf_v2_unigene14515 uagpf v2.0 545
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
• Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
unknown
uagpf_v2_unigene15301 uagpf v2.0 793
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
N-terminus
uagpf_v2_unigene17783 uagpf v2.0 476
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 2.0e-07
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: dna-directed rna polymerase ii subunit rpb7 1.58558e-12
N-terminus
uagpf_v2_unigene20087 uagpf v2.0 624
• AutoFact: S-adenosylmethionine synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJH4_PHYPA 0.0
• FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: s-adenosylmethionine synthase-like isoform 1 0.0
C-terminus
uagpf_v2_unigene27522 uagpf v2.0 249
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
uagpf_v2_unigene33697 uagpf v2.0 419
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
uagpf_v2_unigene46074 uagpf v2.0 373
• AutoFact: S-adenosylmethionine synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJH4_PHYPA 0.0
• Blast2go: s-adenosylmethionine synthase-like isoform 1 0.0
unknown
uagpf_v2_unigene52444 uagpf v2.0 296
• AutoFact: S-adenosylmethionine synthetase [Pinus sylvestris] 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: s-adenosylmethionine synthetase 6.60402e-19
N-terminus
uagpf_v2_unigene52569 uagpf v2.0 288
• AutoFact: S-adenosylmethionine synthetase [Pinus sylvestris] 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: s-adenosylmethionine synthetase 6.60402e-19
N-terminus
uagpf_v2_unigene54160 uagpf v2.0 329
• AutoFact: S-adenosyl-L-methionine synthetase (Fragment) n=2 Tax=Magnoliophyta RepID=A0SE31_ANNCH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: s-adenosylmethionine synthetase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain