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Assembly Name: uagpf v2.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene71 uagpf v2.0 336
AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
C-terminus
uagpf_v2_unigene499 uagpf v2.0 1127
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
N-terminus
uagpf_v2_unigene848 uagpf v2.0 309
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene1059 uagpf v2.0 528
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SG74_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna rna-binding protein kin17 0.0
N-terminus
uagpf_v2_unigene1083 uagpf v2.0 1368
AutoFact: DUF1644 domain containing protein 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
uagpf_v2_unigene1375 uagpf v2.0 860
AutoFact: Nucleic acid binding protein (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBX4_CUCME 0.0
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific demethylase ref6-like 0.0
C-terminus
uagpf_v2_unigene1475 uagpf v2.0 605
AutoFact: Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 n=3 Tax=Oryza sativa RepID=SAP16_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger an1 and c2h2 domain-containing stress-associated protein 16-like 0.0
C-terminus
uagpf_v2_unigene1789 uagpf v2.0 432
AutoFact: D111/G-patch; Zinc finger, C2H2-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
N-terminus
uagpf_v2_unigene1802 uagpf v2.0 703
AutoFact: D111/G-patch; Zinc finger, C2H2-type n=1 Tax=Medicago truncatula RepID=Q2HRQ8_MEDTR 7.0e-32
Blast2go: d111 g-patch domain-containing protein 0.0
Coding
uagpf_v2_unigene2212 uagpf v2.0 784
AutoFact: zf-UBP domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
C-terminus
uagpf_v2_unigene2270 uagpf v2.0 436
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene2305 uagpf v2.0 392
AutoFact: C2H2-type zinc finger protein [Arabidopsis thaliana] gb|AAL55722.1|AF254447_1 WIP2 protein [Arabidopsis thaliana] emb|CAB41188.1| zinc finger-like protein [Arabidopsis thaliana] gb|AAX12859.1| At3g57670 [Arabidopsis thaliana] gb|AEE79685.1| C2H2-type zinc 0.0
Blast2go: transparent testa 1 0.0
unknown
uagpf_v2_unigene2326 uagpf v2.0 660
AutoFact: zinc finger, matrin type 5 [Danio rerio] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding zinc ion binding protein 0.0
Complete
uagpf_v2_unigene2397 uagpf v2.0 1007
AutoFact: myosin XI [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin-h heavy chain-like 0.0
C-terminus
uagpf_v2_unigene2863 uagpf v2.0 407
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAM14872.1| Expressed protein [Arabidopsis thaliana] gb|ABD19677.1| At2g19385 [Arabidopsis thaliana] gb|AEC06875.1| zinc ion binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cell growth-regulating nucleolar 0.0
C-terminus
uagpf_v2_unigene2969 uagpf v2.0 923
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized zinc finger protein 0.0
N-terminus
uagpf_v2_unigene3247 uagpf v2.0 608
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene3475 uagpf v2.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
uagpf_v2_unigene3795 uagpf v2.0 654
AutoFact: Unassigned protein
Blast2go: uncharacterized protein 3.165e-39
Putative coding
uagpf_v2_unigene4281 uagpf v2.0 473
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain