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Assembly Name: uagpf v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36 uagpf v2.0 398
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_028182 [Vitis vinifera] 1.59676e-22
Internal
uagpf_v2_unigene48 uagpf v2.0 399
AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
uagpf_v2_unigene58 uagpf v2.0 681
AutoFact: DUF1336 domain containing protein 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: unknown [Zea mays] 1.93654e-07
Putative N-terminus
uagpf_v2_unigene102 uagpf v2.0 548
AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain-containing protein 1-like 0.0
N-terminus
uagpf_v2_unigene274 uagpf v2.0 131
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.73073e-14
Internal
uagpf_v2_unigene420 uagpf v2.0 435
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene629 uagpf v2.0 1164
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
uagpf_v2_unigene702 uagpf v2.0 669
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 71a1-like 0.0
C-terminus
uagpf_v2_unigene754 uagpf v2.0 342
AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK32768.1|AF361600_1 AT5g02970/F9G14_280 [Arabidopsis thaliana] emb|CAB86051.1| putative protein [Arabidopsis thaliana] gb|AAP21157.1| At5g02970/F9G14_280 [Arabidopsis thaliana] gb|AED90 0.0
Blast2go: alpha beta fold family protein 0.0
Putative coding
uagpf_v2_unigene909 uagpf v2.0 579
AutoFact: Unassigned protein
FL-Next: tr=Putative prolyl 4-hydroxylase, alpha subunit; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: prolyl 4-hydroxylase subunit alpha-1 0.0
C-terminus
uagpf_v2_unigene921 uagpf v2.0 755
AutoFact: Hemolysin III-related family protein (Fragment) n=1 Tax=Lilium longiflorum RepID=A6MH02_LILLO 3.0e-23
Blast2go: protein 4.8157e-26
unknown
uagpf_v2_unigene990 uagpf v2.0 479
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: laccase 0.0
C-terminus
uagpf_v2_unigene1094 uagpf v2.0 1165
AutoFact: Cyclin-L1, putative n=1 Tax=Ricinus communis RepID=B9RTZ2_RICCO 0.0
FL-Next: sp=Cyclin-T1-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclin t1 0.0
Internal
uagpf_v2_unigene1160 uagpf v2.0 1412
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
Putative C-terminus
uagpf_v2_unigene1515 uagpf v2.0 513
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
Blast2go: a g-specific adenine dna glycosylase 0.0
unknown
uagpf_v2_unigene1519 uagpf v2.0 650
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=9 Tax=Oryza sativa RepID=Q109L4_ORYSJ 5.0e-15
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia partial 1.08822e-18
C-terminus
uagpf_v2_unigene1668 uagpf v2.0 468
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7U6B4_VITVI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene1814 uagpf v2.0 449
AutoFact: oxidoreductase [Arabidopsis thaliana] ref|NP_001078177.1| oxidoreductase [Arabidopsis thaliana] gb|AAK62416.1|AF386971_1 Unknown protein [Arabidopsis thaliana] dbj|BAB02034.1| unnamed protein product [Arabidopsis thaliana] gb|AAP37844.1| At3g18210 [Arabid 0.0
Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
Coding
uagpf_v2_unigene1894 uagpf v2.0 996
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene1953 uagpf v2.0 381
AutoFact: LOB domain-containing protein 15 [Arabidopsis thaliana] sp|Q8L5T5.2|LBD15_ARATH RecName: Full=LOB domain-containing protein 15; AltName: Full=ASYMMETRIC LEAVES 2-like protein 11; Short=AS2-like protein 11 gb|AAL38034.1|AF447889_1 LOB DOMAIN 15 [Arabidopsi 2.0e-29
Blast2go: lob domain-containing protein 2.66247e-44
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain