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Assembly Name: uagpf v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene14654 uagpf v2.0 680
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
unknown
uagpf_v2_unigene14735 uagpf v2.0 631
• AutoFact: Cytochrome P450 716B2 n=2 Tax=Picea sitchensis RepID=C16B2_PICSI 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 family protein 0.0
C-terminus
uagpf_v2_unigene14774 uagpf v2.0 663
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SMT7_VITVI 7.00005e-41
• FL-Next: sp=Reticuline oxidase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene14796 uagpf v2.0 634
• AutoFact: PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] ref|NP_973987.1| PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] gb|AAL87252.1| unknown protein [Arabidopsis thaliana] gb|AAM45073.1| unknown protein [Arabidopsis th 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: upf0326 protein at4g17486-like 0.0
C-terminus
uagpf_v2_unigene14965 uagpf v2.0 727
• AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peroxisome biogenesis factor 10-like 0.0
Putative N-terminus
uagpf_v2_unigene15167 uagpf v2.0 371
• AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R7N6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: multidrug resistance 0.0
C-terminus
uagpf_v2_unigene15191 uagpf v2.0 707
• AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|Q9M9A5.1|PCR6_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 6; Short=AtPCR6 gb|AAF69715.1|AC016041_20 F27J15.18 [Arabidopsis thaliana] gb|AAR24706.1| At1g49030 [Arabidopsis thaliana] gb|AAS47652.1| At1 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.4013e-45
Putative Complete
uagpf_v2_unigene15336 uagpf v2.0 845
• AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RPA3_RICCO 0.0
• Blast2go: qa- syp3 sed5p syntaxin 5-type 0.0
unknown
uagpf_v2_unigene15352 uagpf v2.0 473
• AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] ref|NP_851037.2| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] gb|AAM20555.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAN15620.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: lysosomal alpha-mannosidase 0.0
Internal
uagpf_v2_unigene15409 uagpf v2.0 1421
• AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4B8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lob domain-containing protein 0.0
Complete
uagpf_v2_unigene15593 uagpf v2.0 2157
• AutoFact: pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sodium calcium exchanger family protein 0.0
Complete
uagpf_v2_unigene15762 uagpf v2.0 597
• AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 7.00649e-45
• Blast2go: dynamin-related protein 3a-like 0.0
unknown
uagpf_v2_unigene15927 uagpf v2.0 929
• AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9SN36_RICCO 0.0
• FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein root hair defective 3 homolog 1-like 0.0
C-terminus
uagpf_v2_unigene15935 uagpf v2.0 589
• AutoFact: alpha-mannosidase [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis thaliana] emb|CAA72432.1| alpha-mannosidase precursor [Arabidopsis thaliana] dbj|BAB01735.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAK62592.1| AT3g26720/MLJ15_12 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene16111 uagpf v2.0 648
• AutoFact: Cytochrome P450 716B2 n=2 Tax=Picea sitchensis RepID=C16B2_PICSI 0.0
• FL-Next: sp=Cytochrome P450 716B2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 716b2-like 0.0
C-terminus
uagpf_v2_unigene16176 uagpf v2.0 600
• AutoFact: LOB domain-containing protein 15 [Arabidopsis thaliana] sp|Q8L5T5.2|LBD15_ARATH RecName: Full=LOB domain-containing protein 15; AltName: Full=ASYMMETRIC LEAVES 2-like protein 11; Short=AS2-like protein 11 gb|AAL38034.1|AF447889_1 LOB DOMAIN 15 [Arabidopsi 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lob domain-containing protein 3.93765e-43
N-terminus
uagpf_v2_unigene16198 uagpf v2.0 1375
• AutoFact: prolyl 4-hydroxylase [Dianthus caryophyllus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: prolyl 4-hydroxylase subunit alpha-1-like 0.0
Complete
uagpf_v2_unigene16243 uagpf v2.0 479
• AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative Complete
uagpf_v2_unigene16275 uagpf v2.0 422
• AutoFact: Subtilisin-like serine protease n=5 Tax=Arabidopsis RepID=Q8LGA0_ARATH 0.0
• Blast2go: subtilisin-like protease-like 0.0
Coding
uagpf_v2_unigene16289 uagpf v2.0 564
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain