Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10158 uagpf v2.0 453
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB71884.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAO29956.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAQ56798.1| At3g62240 [Arabidopsis thaliana] gb|AEE80326. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene10164 uagpf v2.0 295
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus pinaster (Maritime pine). Plastid; Chloroplast. 0.0
Blast2go: dna-directed rna polymerase i subunit rpa1-like 1.4013e-45
Internal
uagpf_v2_unigene10236 uagpf v2.0 353
AutoFact: transcription cofactor, putative; K04498 E1A/CREB-binding protein [EC:2.3.1.48] 7.9874e-44
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene10237 uagpf v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_016106 [Vitis vinifera] 1.64214e-16
Putative N-terminus
uagpf_v2_unigene10491 uagpf v2.0 666
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
Blast2go: ufd1 like protein 0.0
unknown
uagpf_v2_unigene10620 uagpf v2.0 565
AutoFact: putative receptor-like protein kinase 3 [Glycine max] 0.0
Blast2go: probable receptor-like protein kinase at5g18500-like 0.0
unknown
uagpf_v2_unigene10669 uagpf v2.0 410
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homeobox protein 0.0
Internal
uagpf_v2_unigene10901 uagpf v2.0 585
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: sp=Probable potassium transporter 13; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 0.0
Internal
uagpf_v2_unigene10940 uagpf v2.0 448
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene10950 uagpf v2.0 350
AutoFact: WS02926.CR_L20 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02926_L20 3', mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: strawberry notch-like protein 0.0
C-terminus
uagpf_v2_unigene10961 uagpf v2.0 516
AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9R799_RICCO 0.0
Blast2go: probable serine threonine-protein kinase at1g01540-like 0.0
unknown
uagpf_v2_unigene11008 uagpf v2.0 616
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S558_RICCO 7.0e-16
Blast2go: zinc finger 6.88158e-18
unknown
uagpf_v2_unigene11257 uagpf v2.0 659
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Internal
uagpf_v2_unigene11316 uagpf v2.0 660
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 8.65302e-42
C-terminus
uagpf_v2_unigene11445 uagpf v2.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 3.45145e-40
Internal
uagpf_v2_unigene11569 uagpf v2.0 373
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S558_RICCO 7.0e-16
Blast2go: zinc finger 6.88158e-18
Coding
uagpf_v2_unigene11630 uagpf v2.0 264
AutoFact: TRANSPARENT TESTA 1 protein, putative n=1 Tax=Ricinus communis RepID=B9RIA2_RICCO 0.0
Blast2go: protein transparent testa 1-like 0.0
unknown
uagpf_v2_unigene11734 uagpf v2.0 528
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
C-terminus
uagpf_v2_unigene11837 uagpf v2.0 1431
AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tropinone reductase homolog at1g07440 0.0
Complete
uagpf_v2_unigene11980 uagpf v2.0 1047
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain