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Assembly Name: uagpf v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5953 uagpf v2.0 502
AutoFact: DUF1644 domain containing protein 6.0e-39
Blast2go: uncharacterized protein 0.0
Coding
uagpf_v2_unigene6378 uagpf v2.0 2092
AutoFact: phosphatase SGT1b [Arabidopsis thaliana] sp|Q9SUT5.1|SGT1B_ARATH RecName: Full=Protein SGT1 homolog B; Short=AtSGT1b; AltName: Full=Protein ENHANCED DOWNY MILDEW 1; AltName: Full=Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3; AltName: Full=Suppressor of G 0.0
FL-Next: sp=Protein SGT1 homolog B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sgt1 0.0
Complete
uagpf_v2_unigene6516 uagpf v2.0 616
AutoFact: C2H2-type zinc finger-containing protein [Arabidopsis thaliana] gb|AAK76505.1| unknown protein [Arabidopsis thaliana] gb|AAD31578.2| expressed protein [Arabidopsis thaliana] gb|AAM14308.1| unknown protein [Arabidopsis thaliana] gb|AEC09323.1| C2H2-type zi 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene6586 uagpf v2.0 361
AutoFact: zinc finger protein 706, gene 2 [Xenopus laevis] gb|AAH74174.1| MGC81992 protein [Xenopus laevis] 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 4.62237e-38
Putative Complete
uagpf_v2_unigene6604 uagpf v2.0 719
AutoFact: ABI3-interacting protein 3 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF5_9CONI 0.0
Blast2go: abi3-interacting protein 3 0.0
unknown
uagpf_v2_unigene6645 uagpf v2.0 504
AutoFact: zinc finger protein 706, gene 2 [Xenopus laevis] gb|AAH74174.1| MGC81992 protein [Xenopus laevis] 3.0e-09
Blast2go: zinc finger 4.62237e-38
unknown
uagpf_v2_unigene6699 uagpf v2.0 754
AutoFact: Drought responsive element binding protein 2 n=3 Tax=Glycine max RepID=C5IU97_SOYBN 1.0e-30
Blast2go: dehydration-responsive element binding protein 2 1.38465e-38
unknown
uagpf_v2_unigene6727 uagpf v2.0 529
AutoFact: FPL domain containing protein 7.0e-26
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene6731 uagpf v2.0 485
AutoFact: transcription initiation factor TFIIH subunit H2 [Arabidopsis thaliana] gb|AAM90909.1|AF499443_1 p44/SSL1-like protein [Arabidopsis thaliana] gb|AAC97995.1| Similar to gb|Z30094 basic transcripion factor 2, 44 kD subunit from Homo sapiens. EST gb|W43325 c 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: general transcription factor iih subunit 2-like 0.0
C-terminus
uagpf_v2_unigene6786 uagpf v2.0 586
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
C-terminus
uagpf_v2_unigene6790 uagpf v2.0 1097
AutoFact: Serine/threonine-protein kinase n=1 Tax=Cucumis melo subsp. melo RepID=E5GB79_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Putative C-terminus
uagpf_v2_unigene6859 uagpf v2.0 705
AutoFact: exonuclease-like protein [Arabidopsis thaliana] gb|ACF16171.1| At3g27970 [Arabidopsis thaliana] dbj|BAH30474.1| hypothetical protein [Arabidopsis thaliana] gb|AEE77388.1| exonuclease-like protein [Arabidopsis thaliana] 0.0
Blast2go: exonuclease-like protein 0.0
unknown
uagpf_v2_unigene6862 uagpf v2.0 781
AutoFact: e-cadherin binding protein-like protein [Arabidopsis thaliana] emb|CAB69844.1| putative protein [Arabidopsis thaliana] gb|ABD59082.1| At5g01160 [Arabidopsis thaliana] dbj|BAE99278.1| hypothetical protein [Arabidopsis thaliana] gb|AED90305.1| e-cadherin bi 2.0e-31
FL-Next: tr=Predicted protein; Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). 0.0
Blast2go: e-cadherin binding protein 3.11804e-35
Internal
uagpf_v2_unigene6947 uagpf v2.0 595
AutoFact: DUF1644 domain containing protein 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100820179 9.05301e-28
N-terminus
uagpf_v2_unigene7028 uagpf v2.0 673
AutoFact: protein arginine N-methyltransferase 3 [Arabidopsis thaliana] sp|Q0WVD6.1|ANM3_ARATH RecName: Full=Probable protein arginine N-methyltransferase 3 dbj|BAE98912.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75178.1| protein arginine N-methyltransfer 0.0
FL-Next: sp=Probable protein arginine N-methyltransferase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable protein arginine n-methyltransferase 3-like 0.0
C-terminus
uagpf_v2_unigene7431 uagpf v2.0 389
AutoFact: Receptor-like protein kinase 4 n=2 Tax=Arabidopsis RepID=F4JH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-locus lectin protein kinase family protein 0.0
Internal
uagpf_v2_unigene7527 uagpf v2.0 592
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 3.0e-14
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: zinc-finger protein 3.52208e-22
Internal
uagpf_v2_unigene7652 uagpf v2.0 1075
AutoFact: zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] ref|NP_850780.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 51; Short=AtC3H51 d 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 15; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 51 0.0
C-terminus
uagpf_v2_unigene7720 uagpf v2.0 511
AutoFact: FPL domain containing protein 7.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene7760 uagpf v2.0 655
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 1.4013e-45
Blast2go: zinc finger 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain