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Assembly Name: uagpf v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3029 uagpf v2.0 471
AutoFact: Pectinesterase n=1 Tax=Vitis vinifera RepID=A5BYJ7_VITVI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene3247 uagpf v2.0 608
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene3475 uagpf v2.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
uagpf_v2_unigene3776 uagpf v2.0 397
AutoFact: putative potassium transporter [Vicia faba] 0.0
Blast2go: potassium transporter 0.0
unknown
uagpf_v2_unigene3795 uagpf v2.0 654
AutoFact: Unassigned protein
Blast2go: uncharacterized protein 3.165e-39
Putative coding
uagpf_v2_unigene3823 uagpf v2.0 969
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene3961 uagpf v2.0 1447
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene4039 uagpf v2.0 605
AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 0.0
Blast2go: e3 ubiquitin-protein ligase prt1 0.0
unknown
uagpf_v2_unigene4169 uagpf v2.0 937
AutoFact: protein kinase-like protein [Vitis aestivalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase family protein 0.0
Putative N-terminus
uagpf_v2_unigene4243 uagpf v2.0 786
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high affinity potassium transporter 0.0
C-terminus
uagpf_v2_unigene4281 uagpf v2.0 473
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
Coding
uagpf_v2_unigene4466 uagpf v2.0 440
AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
Blast2go: protein kinase family protein 0.0
unknown
uagpf_v2_unigene4613 uagpf v2.0 2146
AutoFact: Altered response to gravity (Arg1), plant, putative n=1 Tax=Ricinus communis RepID=B9S2J6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: altered response to gravity 0.0
Complete
uagpf_v2_unigene4655 uagpf v2.0 582
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
uagpf_v2_unigene4688 uagpf v2.0 458
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
N-terminus
uagpf_v2_unigene4937 uagpf v2.0 523
AutoFact: Potassium transporter 26 n=2 Tax=Oryza sativa RepID=HAK26_ORYSJ 1.0e-21
FL-Next: sp=Potassium transporter 26; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 6-like 1.94143e-27
Internal
uagpf_v2_unigene5294 uagpf v2.0 596
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 9.99995e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene5469 uagpf v2.0 1449
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene5585 uagpf v2.0 720
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene5605 uagpf v2.0 659
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SG74_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna rna-binding protein kin17 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain