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Assembly Name: uagpf v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene47454 uagpf v2.0 429
AutoFact: Dimer_Tnp_hAT domain containing protein 7.0e-11
Blast2go: uncharacterized protein loc100255782 0.0
Coding
uagpf_v2_unigene47568 uagpf v2.0 268
AutoFact: Unassigned protein
Blast2go: protein 7.8743e-13
Putative coding
uagpf_v2_unigene47811 uagpf v2.0 357
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon like protein 0.0
C-terminus
uagpf_v2_unigene47888 uagpf v2.0 299
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y0_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 2.74428e-16
C-terminus
uagpf_v2_unigene47929 uagpf v2.0 312
AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AEE79818.1| protein kinase family protein [Arabidopsis thaliana] 0.0
Blast2go: protein kinase family protein 0.0
unknown
uagpf_v2_unigene47989 uagpf v2.0 307
AutoFact: CAF protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene48091 uagpf v2.0 313
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ufd1 like protein 0.0
Internal
uagpf_v2_unigene48362 uagpf v2.0 320
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Internal
uagpf_v2_unigene48772 uagpf v2.0 347
AutoFact: Unassigned protein
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: at3g02260-like protein 0.0
Internal
uagpf_v2_unigene49049 uagpf v2.0 274
AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
uagpf_v2_unigene49251 uagpf v2.0 392
AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9R799_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable serine threonine-protein kinase at1g01540-like 0.0
Internal
uagpf_v2_unigene49275 uagpf v2.0 420
AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 622 0.0
N-terminus
uagpf_v2_unigene49969 uagpf v2.0 520
AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip 5.0e-32
Blast2go: transcription factor bhlh140-like 2.10195e-43
Putative coding
uagpf_v2_unigene49978 uagpf v2.0 509
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=OSIGBa0142I02-OSIGBa0101B20.23 protein; Oryza sativa (Rice). 0.0
Blast2go: ring finger 0.0
C-terminus
uagpf_v2_unigene50093 uagpf v2.0 236
AutoFact: phosphatase SGT1b [Arabidopsis thaliana] sp|Q9SUT5.1|SGT1B_ARATH RecName: Full=Protein SGT1 homolog B; Short=AtSGT1b; AltName: Full=Protein ENHANCED DOWNY MILDEW 1; AltName: Full=Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3; AltName: Full=Suppressor of G 0.0
Blast2go: sgt1 0.0
unknown
uagpf_v2_unigene50166 uagpf v2.0 394
AutoFact: DUF1644 domain containing protein 3.0e-30
Blast2go: uncharacterized protein loc100820179 9.05301e-28
unknown
uagpf_v2_unigene50432 uagpf v2.0 356
AutoFact: zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] gb|AEC07483.1| zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] 1.96182e-44
FL-Next: sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase suvr5-like 0.0
Internal
uagpf_v2_unigene50444 uagpf v2.0 352
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: ankyrin repeat and zinc finger domain-containing protein 1-like 7.1968e-18
Putative C-terminus
uagpf_v2_unigene50560 uagpf v2.0 289
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 1 2.41304e-40
Internal
uagpf_v2_unigene50614 uagpf v2.0 255
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein ZAT2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: epf-type cis2-his2 zinc finger transcription factor 6.48619e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain