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Assembly Name: uagpf v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene12220 uagpf v2.0 731
AutoFact: CBS and transporter associated domain-containing protein n=2 Tax=Arabidopsis RepID=F4IGE5_ARATH 0.0
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at2g14520-like 0.0
N-terminus
uagpf_v2_unigene12266 uagpf v2.0 401
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
C-terminus
uagpf_v2_unigene12344 uagpf v2.0 482
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100807419 4.02256e-37
Internal
uagpf_v2_unigene12750 uagpf v2.0 1473
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 4 0.0
N-terminus
uagpf_v2_unigene12888 uagpf v2.0 574
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
Blast2go: dead box rna helicase 0.0
Coding
uagpf_v2_unigene12904 uagpf v2.0 734
AutoFact: ARGONAUTE 1 n=2 Tax=Nicotiana RepID=D6RUV9_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: argonaute protein group 0.0
C-terminus
uagpf_v2_unigene12953 uagpf v2.0 312
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
Internal
uagpf_v2_unigene13204 uagpf v2.0 618
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene13225 uagpf v2.0 1869
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEC06308.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cbs domain-containing protein 0.0
Complete
uagpf_v2_unigene13612 uagpf v2.0 689
AutoFact: copia-type reverse transcriptase-like protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.58732e-43
C-terminus
uagpf_v2_unigene13632 uagpf v2.0 746
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
uagpf_v2_unigene13642 uagpf v2.0 528
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.1288e-29
Internal
uagpf_v2_unigene13686 uagpf v2.0 560
AutoFact: alpha-mannosidase [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis thaliana] emb|CAA72432.1| alpha-mannosidase precursor [Arabidopsis thaliana] dbj|BAB01735.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAK62592.1| AT3g26720/MLJ15_12 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: lysosomal alpha-mannosidase 0.0
Putative N-terminus
uagpf_v2_unigene13793 uagpf v2.0 674
AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: PREDICTED: uncharacterized protein LOC100818429 [Glycine max] 0.0
N-terminus
uagpf_v2_unigene13809 uagpf v2.0 690
AutoFact: putative protein kinase [Arabidopsis thaliana] gb|AAC04483.1| putative protein kinase [Arabidopsis thaliana] 0.0
Blast2go: receptor like protein kinase -like 0.0
Coding
uagpf_v2_unigene13832 uagpf v2.0 395
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Internal
uagpf_v2_unigene13857 uagpf v2.0 659
AutoFact: Probable L-type lectin-domain containing receptor kinase S.5 n=2 Tax=Arabidopsis RepID=LRKS5_ARATH 0.0
Blast2go: probable l-type lectin-domain containing receptor kinase -like 0.0
unknown
uagpf_v2_unigene13868 uagpf v2.0 571
AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SNS7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: qa- sso1 syntaxin1- syp12a-group 0.0
N-terminus
uagpf_v2_unigene14072 uagpf v2.0 1382
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase protein 9 0.0
Complete
uagpf_v2_unigene14542 uagpf v2.0 542
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
Blast2go: argonaute protein group 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain