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Assembly Name: biogeco1 v2.0

Name: transmembrane transport

Term: GO:0055085  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog1_v2.0_unigene15 biogeco1 v2.0 1540
AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
FL-Next: sp=Putative chloride channel-like protein CLC-g; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 0.0
C-terminus
biog1_v2.0_unigene81 biogeco1 v2.0 947
AutoFact: RNA splicing protein mrs2, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9S827_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: magnesium transporter 0.0
C-terminus
biog1_v2.0_unigene142 biogeco1 v2.0 733
AutoFact: Salt overly sensitive 1 n=2 Tax=Vitis vinifera RepID=D0V1M4_VITVI 3.0e-17
FL-Next: sp=Sodium/hydrogen exchanger 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: na+ h+ antiporter 4.16546e-18
C-terminus
biog1_v2.0_unigene295 biogeco1 v2.0 1336
AutoFact: [GEPR] COG0477 Permeases of the major facilitator superfamily 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sodium-dependent phosphate transport protein 0.0
C-terminus
biog1_v2.0_unigene381 biogeco1 v2.0 632
AutoFact: ABC transporter C family member 5 n=4 Tax=Arabidopsis RepID=AB5C_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 5-like 0.0
C-terminus
biog1_v2.0_unigene442 biogeco1 v2.0 511
AutoFact: SecY protein (Fragment) n=2 Tax=Malpighiales RepID=B9IM48_POPTR 0.0
FL-Next: sp=Preprotein translocase subunit secY, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: preprotein translocase subunit chloroplastic-like 0.0
Putative C-terminus
biog1_v2.0_unigene500 biogeco1 v2.0 229
AutoFact: root uracil permease 1 [Oryza sativa Japonica Group] 0.0
Blast2go: nucleobase-ascorbate transporter 6-like 0.0
unknown
biog1_v2.0_unigene513 biogeco1 v2.0 511
AutoFact: RecName: Full=Magnesium transporter MRS2-F sp|A2WY50.1|MRS2F_ORYSI RecName: Full=Magnesium transporter MRS2-F dbj|BAB92573.1| P0497A05.17 [Oryza sativa Japonica Group] dbj|BAB92606.1| putative MRS2-7 [Oryza sativa Japonica Group] dbj|BAD82756.1| putative 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: magnesium transporter 4.50607e-34
C-terminus
biog1_v2.0_unigene535 biogeco1 v2.0 648
AutoFact: H+/Ca2+ exchanger 2 n=1 Tax=Ipomoea nil RepID=Q9ZQT4_IPONI 0.0
FL-Next: sp=Vacuolar cation/proton exchanger 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: vacuolar cation proton exchanger 2-like 0.0
N-terminus
biog1_v2.0_unigene573 biogeco1 v2.0 602
AutoFact: RecName: Full=Cation-chloride cotransporter 1; Short=OsCCC1; AltName: Full=Potassium-chloride cotransporter 1 dbj|BAD03666.1| putative Na+/K+/Cl-cotransport protein [Oryza sativa Japonica Group] gb|EAZ42309.1| hypothetical protein OsJ_26882 [Oryza sativa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog1_v2.0_unigene605 biogeco1 v2.0 537
AutoFact: RecName: Full=Probable metal-nicotianamine transporter YSL6; AltName: Full=Protein YELLOW STRIPE LIKE 6; Short=OsYSL6 emb|CAE02278.1| OSJNBa0055C08.1 [Oryza sativa Japonica Group] dbj|BAG94466.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable metal-nicotianamine transporter ysl6-like isoform 1 0.0
Internal
biog1_v2.0_unigene783 biogeco1 v2.0 739
AutoFact: Sialin, putative n=1 Tax=Ricinus communis RepID=B9SPE0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anion transporter 4 0.0
Internal
biog1_v2.0_unigene842 biogeco1 v2.0 583
AutoFact: SPX domain-containing membrane protein [Arabidopsis thaliana] sp|Q9T050.1|SPXM2_ARATH RecName: Full=SPX domain-containing membrane protein At4g11810 emb|CAB44319.1| putative protein [Arabidopsis thaliana] emb|CAB78224.1| putative protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: spx domain-containing membrane protein 0.0
Internal
biog1_v2.0_unigene906 biogeco1 v2.0 1201
AutoFact: PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB 0.0
FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: auxin efflux carrier component 0.0
C-terminus
biog1_v2.0_unigene991 biogeco1 v2.0 3163
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
C-terminus
biog1_v2.0_unigene1085 biogeco1 v2.0 1170
AutoFact: K(+) efflux antiporter 4 n=3 Tax=Arabidopsis RepID=KEA4_ARATH 0.0
FL-Next: sp=K(+) efflux antiporter 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium efflux antiporter 0.0
N-terminus
biog1_v2.0_unigene1095 biogeco1 v2.0 586
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: mdr-like abc transporter 0.0
Internal
biog1_v2.0_unigene1117 biogeco1 v2.0 1469
AutoFact: Nucleobase ascorbate transporter n=6 Tax=rosids RepID=B9H2G7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleobase ascorbate transporter 0.0
C-terminus
biog1_v2.0_unigene1277 biogeco1 v2.0 1478
AutoFact: root uracil permease 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleobase-ascorbate transporter 6-like 0.0
C-terminus
biog1_v2.0_unigene1335 biogeco1 v2.0 761
AutoFact: Putative inositol transporter (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKB0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable inositol transporter 2-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain