Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: ring u-box domain-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene2619 biogeco2 v2.0 988
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Complete
biog2_v2.0_unigene3078 biogeco2 v2.0 952
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
biog2_v2.0_unigene4047 biogeco2 v2.0 395
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene4256 biogeco2 v2.0 452
• AutoFact: Zinc finger family protein (Fragment) n=2 Tax=Picea RepID=Q3ZDI3_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene7096 biogeco2 v2.0 585
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene7291 biogeco2 v2.0 631
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene8188 biogeco2 v2.0 494
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Putative Complete
biog2_v2.0_unigene8199 biogeco2 v2.0 524
• AutoFact: Zinc finger family protein (Fragment) n=2 Tax=Picea RepID=Q3ZDI3_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Putative N-terminus
biog2_v2.0_unigene10970 biogeco2 v2.0 341
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Putative coding
biog2_v2.0_unigene11396 biogeco2 v2.0 366
• AutoFact: [K] COG5175 Transcriptional repressor 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
biog2_v2.0_unigene13467 biogeco2 v2.0 397
• AutoFact: Unassigned protein
• Blast2go: ring u-box domain-containing protein 0.0
unknown
biog2_v2.0_unigene13921 biogeco2 v2.0 405
• AutoFact: [K] COG5175 Transcriptional repressor 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene14372 biogeco2 v2.0 330
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
• Blast2go: ring u-box domain-containing protein 0.0
unknown
biog2_v2.0_unigene15028 biogeco2 v2.0 181
• AutoFact: pfam03854, zf-P11, P-11 zinc finger 0.0001
• Blast2go: ring u-box domain-containing protein 0.0
unknown
biog2_v2.0_unigene15076 biogeco2 v2.0 277
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
biog2_v2.0_unigene15327 biogeco2 v2.0 309
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Putative coding
biog2_v2.0_unigene15635 biogeco2 v2.0 309
• AutoFact: [K] COG5175 Transcriptional repressor 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene16495 biogeco2 v2.0 297
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene16747 biogeco2 v2.0 373
• AutoFact: pfam03854, zf-P11, P-11 zinc finger 0.0001
• FL-Next: tr=cDNA clone:J023011H14, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Complete
biog2_v2.0_unigene17542 biogeco2 v2.0 315
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 2.99878e-43
• Blast2go: ring u-box domain-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain