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Assembly Name: biogeco2 v2.0

Name: membrane protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene3804 biogeco2 v2.0 1247
AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
C-terminus
biog2_v2.0_unigene3838 biogeco2 v2.0 280
AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
N-terminus
biog2_v2.0_unigene5490 biogeco2 v2.0 460
AutoFact: Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|NP_564279.1| Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|XP_002890722.1| hypothetical protein ARALYDRAFT_472929 [Arabidopsis lyrata subsp. lyrata] ref|XP_00289 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 9.12863e-16
Complete
biog2_v2.0_unigene7453 biogeco2 v2.0 480
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Putative N-terminus
biog2_v2.0_unigene13288 biogeco2 v2.0 259
AutoFact: Sad1_UNC domain containing protein 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal
biog2_v2.0_unigene14687 biogeco2 v2.0 200
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
Blast2go: membrane protein 0.0
unknown
biog2_v2.0_unigene15776 biogeco2 v2.0 197
AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain