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Assembly Name: biogeco2 v2.0

Name: rna binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene624 biogeco2 v2.0 963
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59923.1| unknown protein [Arabidopsis thaliana] gb|AAM20239.1| unknown protein [Arabidopsis thaliana] gb|AAM62467.1| unkno 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
biog2_v2.0_unigene668 biogeco2 v2.0 742
AutoFact: OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] gb|AEC09877.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Putative Complete
biog2_v2.0_unigene1771 biogeco2 v2.0 184
AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
biog2_v2.0_unigene8104 biogeco2 v2.0 650
AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 7.34968e-22
C-terminus
biog2_v2.0_unigene9807 biogeco2 v2.0 723
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Internal
biog2_v2.0_unigene11831 biogeco2 v2.0 421
AutoFact: RNA binding protein n=4 Tax=Andropogoneae RepID=B6U6Y1_MAIZE 3.0e-07
Blast2go: rna binding protein 3.04794e-26
unknown
biog2_v2.0_unigene12977 biogeco2 v2.0 376
AutoFact: ENT domain containing protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 1.96821e-13
C-terminus
biog2_v2.0_unigene13133 biogeco2 v2.0 243
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
biog2_v2.0_unigene13488 biogeco2 v2.0 265
AutoFact: ENT domain containing protein 6.0e-12
Blast2go: rna binding protein 1.96821e-13
unknown
biog2_v2.0_unigene17178 biogeco2 v2.0 248
AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
Blast2go: rna binding protein 0.0
unknown
biog2_v2.0_unigene18042 biogeco2 v2.0 240
AutoFact: ENT domain containing protein 6.0e-12
Blast2go: rna binding protein 1.96821e-13
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain