Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: rna recognition motif-containing protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene11882 biogeco2 v2.0 221
AutoFact: Unassigned protein
Blast2go: rna recognition motif-containing protein 0.0
unknown
biog2_v2.0_unigene11939 biogeco2 v2.0 530
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001030873.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAR23731.1| At3g56510 [Arabidopsis thaliana] gb|AAS68115.1| At3g56510 [Arabidopsis thaliana] dbj|BAF0014 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
biog2_v2.0_unigene11996 biogeco2 v2.0 432
AutoFact: putative RNA binding ribonucleoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Expressed protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna recognition motif-containing protein 0.0
N-terminus
biog2_v2.0_unigene12567 biogeco2 v2.0 196
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
N-terminus
biog2_v2.0_unigene14451 biogeco2 v2.0 121
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59923.1| unknown protein [Arabidopsis thaliana] gb|AAM20239.1| unknown protein [Arabidopsis thaliana] gb|AAM62467.1| unkno 3.0e-30
Blast2go: rna recognition motif-containing protein 0.0
unknown
biog2_v2.0_unigene15215 biogeco2 v2.0 224
AutoFact: Os01g0367300 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JJM4_ORYSJ 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
biog2_v2.0_unigene16518 biogeco2 v2.0 328
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
biog2_v2.0_unigene16867 biogeco2 v2.0 155
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAC42069.1| unknown protein [Arabidopsis thaliana] gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
Blast2go: rna recognition motif-containing protein 0.0
unknown
biog2_v2.0_unigene17462 biogeco2 v2.0 516
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
N-terminus
biog2_v2.0_unigene17522 biogeco2 v2.0 569
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
biog2_v2.0_unigene17952 biogeco2 v2.0 126
AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
Blast2go: rna recognition motif-containing protein 0.0
unknown
biog2_v2.0_unigene18872 biogeco2 v2.0 304
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
biog2_v2.0_unigene19164 biogeco2 v2.0 365
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001031566.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAK32943.1|AF367357_1 AT4g00830/A_TM018A10_14 [Arabidopsis thaliana] gb|AAM47474.1| AT4g00830/A_TM018A10 0.0
Blast2go: rna recognition motif-containing protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain