Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: ring finger

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene958 biogeco2 v2.0 540
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=OSIGBa0142I02-OSIGBa0101B20.23 protein; Oryza sativa (Rice). 0.0
Blast2go: ring finger 0.0
C-terminus
biog2_v2.0_unigene2220 biogeco2 v2.0 208
AutoFact: RING-H2 finger protein ATL52 [Arabidopsis thaliana] sp|Q9LF64.1|ATL52_ARATH RecName: Full=RING-H2 finger protein ATL52 emb|CAC01904.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] gb|AED92447.1| RING-H2 finger protein ATL52 [Arabidopsis thalian 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Putative C-terminus
biog2_v2.0_unigene8285 biogeco2 v2.0 609
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 8.0e-35
Blast2go: ring finger 0.0
Putative coding
biog2_v2.0_unigene15123 biogeco2 v2.0 192
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: sp=Putative E3 ubiquitin-protein ligase ARI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring finger 0.0
Internal
biog2_v2.0_unigene15203 biogeco2 v2.0 435
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 4.99997e-41
Blast2go: ring finger 8.7804e-41
Coding
biog2_v2.0_unigene15264 biogeco2 v2.0 445
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 4.0e-13
Blast2go: ring finger 9.22203e-14
unknown
biog2_v2.0_unigene16892 biogeco2 v2.0 314
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 8.0e-35
Blast2go: ring finger 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain