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Assembly Name: biogeco2 v2.0

Name: pentatricopeptide repeat-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene14814 biogeco2 v2.0 177
• AutoFact: DNA-binding protein [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene14976 biogeco2 v2.0 499
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized protein At3g49140; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene15068 biogeco2 v2.0 247
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15630, mitochondrial; Flags: Precursor gb|AAD17407.1| putative salt-inducible protein [Arabidopsis tha 9.0e-29
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g15630, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.4804e-41
Putative C-terminus
biog2_v2.0_unigene15603 biogeco2 v2.0 297
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.14515e-28
Internal
biog2_v2.0_unigene15651 biogeco2 v2.0 422
• AutoFact: pfam12854, PPR_1, PPR repeat 4.0e-06
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative coding
biog2_v2.0_unigene15664 biogeco2 v2.0 330
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene15787 biogeco2 v2.0 153
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g46870; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene16078 biogeco2 v2.0 257
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene16135 biogeco2 v2.0 285
• AutoFact: Pentatricopeptide repeat-containing protein (Fragment) n=2 Tax=Neospartoneae RepID=D2DI16_9LAMI 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.57593e-13
Internal
biog2_v2.0_unigene16278 biogeco2 v2.0 465
• AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
biog2_v2.0_unigene16288 biogeco2 v2.0 208
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene16292 biogeco2 v2.0 569
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene16293 biogeco2 v2.0 552
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9S733.1|PP196_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40240, mitochondrial; Flags: Precursor gb|AAD25939.1|AF085279_12 hypothetical protein [Arabidopsis tha 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
biog2_v2.0_unigene16694 biogeco2 v2.0 205
• AutoFact: pfam12854, PPR_1, PPR repeat 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.20394e-12
Internal
biog2_v2.0_unigene17383 biogeco2 v2.0 382
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010 dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75762.1| pentatricopeptide 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.89594e-21
Internal
biog2_v2.0_unigene18198 biogeco2 v2.0 422
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized protein At3g49140; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog2_v2.0_unigene18784 biogeco2 v2.0 243
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative Complete
biog2_v2.0_unigene19086 biogeco2 v2.0 474
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S6R2_RICCO 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain