Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: nucleic acid binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene158 biogeco2 v2.0 414
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB75799.1| hypothetical protein [Arabidopsis thaliana] gb|AAY25452.1| At3g59800 [Arabidopsis thaliana] gb|AEE79970.1| uncharacterized protein [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
biog2_v2.0_unigene526 biogeco2 v2.0 602
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene3139 biogeco2 v2.0 822
AutoFact: Zinc finger, CCCH-type n=1 Tax=Medicago truncatula RepID=A2Q3L5_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Putative C-terminus
biog2_v2.0_unigene3154 biogeco2 v2.0 1246
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Complete
biog2_v2.0_unigene4496 biogeco2 v2.0 972
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene4748 biogeco2 v2.0 834
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S290_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene5781 biogeco2 v2.0 508
AutoFact: pfam12810, Gly_rich, Glycine rich protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene7262 biogeco2 v2.0 606
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene7376 biogeco2 v2.0 551
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3U9_RICCO 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 2.95289e-40
Internal
biog2_v2.0_unigene7394 biogeco2 v2.0 716
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFQ6_RICCO 1.0e-31
Blast2go: nucleic acid binding 1.56577e-32
unknown
biog2_v2.0_unigene9249 biogeco2 v2.0 473
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene9288 biogeco2 v2.0 400
AutoFact: zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana] ref|NP_001078078.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana] sp|Q84W91.2|C3H32_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 32; Short=AtC3H3 0.0
Blast2go: nucleic acid binding 0.0
Putative coding
biog2_v2.0_unigene9498 biogeco2 v2.0 527
AutoFact: pfam12810, Gly_rich, Glycine rich protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Putative N-terminus
biog2_v2.0_unigene9614 biogeco2 v2.0 456
AutoFact: Unassigned protein
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene9801 biogeco2 v2.0 415
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ95_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene11197 biogeco2 v2.0 347
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene12497 biogeco2 v2.0 220
AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene13649 biogeco2 v2.0 160
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RUQ0_RICCO 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
biog2_v2.0_unigene14221 biogeco2 v2.0 371
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9R880_RICCO 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 2.65497e-38
Internal
biog2_v2.0_unigene15250 biogeco2 v2.0 388
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S290_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain