Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: protein binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene11301 biogeco2 v2.0 371
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
C-terminus
biog2_v2.0_unigene13979 biogeco2 v2.0 162
AutoFact: DUF3424 multi-domain protein 1.0e-10
Blast2go: protein binding 0.0
unknown
biog2_v2.0_unigene14692 biogeco2 v2.0 352
AutoFact: DUF3424 multi-domain protein 1.0e-10
FL-Next: tr=Os07g0436000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein binding 0.0
Internal
biog2_v2.0_unigene14896 biogeco2 v2.0 670
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SB23_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
C-terminus
biog2_v2.0_unigene15516 biogeco2 v2.0 418
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
C-terminus
biog2_v2.0_unigene16407 biogeco2 v2.0 409
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
N-terminus
biog2_v2.0_unigene16555 biogeco2 v2.0 248
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Internal
biog2_v2.0_unigene16779 biogeco2 v2.0 410
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42417.1| unknown protein [Arabidopsis thaliana] gb|AAP68217.1| At3g05250 [Arabidopsis thaliana] gb|AAZ14063.1| At3g05250 [Arabidopsis thaliana] gb|AEE74211.1| RING/U-box domain-containing 2.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein binding 3.7602e-37
Putative N-terminus
biog2_v2.0_unigene19398 biogeco2 v2.0 441
AutoFact: pfam03107, C1_2, C1 domain 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 8.73953e-40
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain