Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: DNA topoisomerase (ATP-hydrolyzing) activity

Term: GO:0003918  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene1265 biogeco2 v2.0 704
• AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase 6 subunit b 0.0
C-terminus
biog2_v2.0_unigene2773 biogeco2 v2.0 1016
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog2_v2.0_unigene8471 biogeco2 v2.0 456
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog2_v2.0_unigene8625 biogeco2 v2.0 490
• AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase 6 subunit b 0.0
N-terminus
biog2_v2.0_unigene9222 biogeco2 v2.0 323
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• Blast2go: dna topoisomerase 1 1.4013e-45
Coding
biog2_v2.0_unigene9984 biogeco2 v2.0 430
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• Blast2go: dna topoisomerase 1 1.4013e-45
Coding
biog2_v2.0_unigene11424 biogeco2 v2.0 376
• AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit b 0.0
Internal
biog2_v2.0_unigene11909 biogeco2 v2.0 217
• AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
• Blast2go: dna topoisomerase 6 subunit a-like 0.0
unknown
biog2_v2.0_unigene12011 biogeco2 v2.0 391
• AutoFact: DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 3.21293e-22
C-terminus
biog2_v2.0_unigene12079 biogeco2 v2.0 560
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit a 0.0
Complete
biog2_v2.0_unigene13939 biogeco2 v2.0 538
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
N-terminus
biog2_v2.0_unigene17241 biogeco2 v2.0 268
• AutoFact: DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain