Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: poly(A)+ mRNA export from nucleus

Term: GO:0016973  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene1747 biogeco2 v2.0 469
• AutoFact: DUF2074 domain containing protein 5.0e-05
• Blast2go: protein 2.81442e-18
Coding
biog2_v2.0_unigene2416 biogeco2 v2.0 478
• AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
C-terminus
biog2_v2.0_unigene3946 biogeco2 v2.0 590
• AutoFact: DUF2074 domain containing protein 5.0e-05
• Blast2go: protein 2.81442e-18
unknown
biog2_v2.0_unigene10393 biogeco2 v2.0 406
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAK55696.1|AF378893_1 AT5g02770/F9G14_80 [Arabidopsis thaliana] emb|CAB86031.1| putative protein [Arabidopsis thaliana] gb|AAK91488.1| AT5g02770/F9G14_80 [Arabidopsis thaliana] dbj|BAD95440.1| putative pro 4.0e-09
• Blast2go: protein 2.05244e-12
Putative coding
biog2_v2.0_unigene11343 biogeco2 v2.0 377
• AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
Internal
biog2_v2.0_unigene12344 biogeco2 v2.0 439
• AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleoprotein tpr 0.0
Complete
biog2_v2.0_unigene13668 biogeco2 v2.0 219
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAK55696.1|AF378893_1 AT5g02770/F9G14_80 [Arabidopsis thaliana] emb|CAB86031.1| putative protein [Arabidopsis thaliana] gb|AAK91488.1| AT5g02770/F9G14_80 [Arabidopsis thaliana] dbj|BAD95440.1| putative pro 4.0e-09
• Blast2go: protein 2.05244e-12
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain