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Assembly Name: biogeco2 v2.0

Name: poly(U) RNA binding

Term: GO:0008266  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9 biogeco2 v2.0 499
AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene46 biogeco2 v2.0 411
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
N-terminus
biog2_v2.0_unigene849 biogeco2 v2.0 667
AutoFact: ferredoxin-NADP+ reductase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-nadp+ reductase 0.0
N-terminus
biog2_v2.0_unigene3280 biogeco2 v2.0 1457
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
biog2_v2.0_unigene4098 biogeco2 v2.0 1519
AutoFact: hydroxypyruvate reductase [Bruguiera gymnorhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxypyruvate reductase 0.0
Complete
biog2_v2.0_unigene7057 biogeco2 v2.0 567
AutoFact: ferredoxin-NADP+ reductase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-nadp+ reductase 0.0
C-terminus
biog2_v2.0_unigene7374 biogeco2 v2.0 516
AutoFact: mRNA-binding protein precursor [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna binding protein precursor-like 0.0
C-terminus
biog2_v2.0_unigene7587 biogeco2 v2.0 533
AutoFact: mRNA-binding protein precursor [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna binding protein precursor-like 0.0
N-terminus
biog2_v2.0_unigene8689 biogeco2 v2.0 755
AutoFact: [R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ghmp kinase family protein 0.0
N-terminus
biog2_v2.0_unigene9591 biogeco2 v2.0 398
AutoFact: [R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ghmp kinase family protein 0.0
C-terminus
biog2_v2.0_unigene9639 biogeco2 v2.0 300
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Internal
biog2_v2.0_unigene10372 biogeco2 v2.0 279
AutoFact: [R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase 2.0e-06
Blast2go: ghmp kinase family protein 0.0
unknown
biog2_v2.0_unigene17359 biogeco2 v2.0 215
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
Blast2go: 33 kda chloroplastic-like 0.0
unknown
biog2_v2.0_unigene17832 biogeco2 v2.0 496
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 33 kda chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene17848 biogeco2 v2.0 697
AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene19205 biogeco2 v2.0 504
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain