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Assembly Name: biogeco2 v2.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene939 biogeco2 v2.0 844
AutoFact: 60S ribosomal protein L27 n=2 Tax=Picea sitchensis RepID=A9NQ84_PICSI 0.0
FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l27 0.0
Complete
biog2_v2.0_unigene1776 biogeco2 v2.0 728
AutoFact: 60S ribosomal protein L23 n=41 Tax=Embryophyta RepID=RL23_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23 0.0
Complete
biog2_v2.0_unigene1973 biogeco2 v2.0 547
AutoFact: RecName: Full=60S ribosomal protein L35 gb|AAF34800.1|AF227980_1 60S ribosomal protein L35 [Euphorbia esula] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35 0.0
Complete
biog2_v2.0_unigene3064 biogeco2 v2.0 1496
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l4-1 0.0
Complete
biog2_v2.0_unigene3094 biogeco2 v2.0 635
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin fusion protein 0.0
Complete
biog2_v2.0_unigene5202 biogeco2 v2.0 747
AutoFact: 60S ribosomal protein L27a-3 [Arabidopsis thaliana] ref|XP_002888788.1| 60S ribosomal protein L27A [Arabidopsis lyrata subsp. lyrata] sp|P49637.2|R27A3_ARATH RecName: Full=60S ribosomal protein L27a-3 gb|AAG52338.1|AC011663_17 60S ribosomal protein L27A; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene5216 biogeco2 v2.0 925
AutoFact: 60S ribosomal protein L21 n=9 Tax=Poaceae RepID=Q9AV87_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l21 0.0
Complete
biog2_v2.0_unigene5247 biogeco2 v2.0 1147
AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 0.0
Complete
biog2_v2.0_unigene5349 biogeco2 v2.0 779
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35 0.0
Complete
biog2_v2.0_unigene5396 biogeco2 v2.0 514
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
Complete
biog2_v2.0_unigene5406 biogeco2 v2.0 928
AutoFact: ribosomal protein L7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l7 0.0
Complete
biog2_v2.0_unigene5466 biogeco2 v2.0 1082
AutoFact: ribosomal protein L7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l7 0.0
Putative Complete
biog2_v2.0_unigene5617 biogeco2 v2.0 728
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l38 1.86457e-38
Complete
biog2_v2.0_unigene5836 biogeco2 v2.0 744
AutoFact: 60S ribosomal protein L35a-1 n=16 Tax=rosids RepID=R35A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35a 0.0
Complete
biog2_v2.0_unigene5970 biogeco2 v2.0 778
AutoFact: 60S ribosomal protein L23 n=41 Tax=Embryophyta RepID=RL23_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23 0.0
Complete
biog2_v2.0_unigene6082 biogeco2 v2.0 632
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l38 6.16412e-40
Complete
biog2_v2.0_unigene6171 biogeco2 v2.0 652
AutoFact: PREDICTED: similar to 60S ribosomal protein L29 [Vitis vinifera] emb|CAN63474.1| hypothetical protein VITISV_016797 [Vitis vinifera] emb|CBI36938.3| unnamed protein product [Vitis vinifera] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.74433e-16
Complete
biog2_v2.0_unigene6237 biogeco2 v2.0 769
AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 0.0
Complete
biog2_v2.0_unigene7924 biogeco2 v2.0 698
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
Blast2go: 60s ribosomal protein l35 0.0
unknown
biog2_v2.0_unigene8322 biogeco2 v2.0 370
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: large subunit ribosomal protein l24e 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain