Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: regulation of seed germination

Term: GO:0010029  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene960 biogeco2 v2.0 682
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
C-terminus
biog2_v2.0_unigene1018 biogeco2 v2.0 551
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: Isoform 2 of Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 0.0
Blast2go: histidine kinase 0.0
Internal
biog2_v2.0_unigene3896 biogeco2 v2.0 319
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
N-terminus
biog2_v2.0_unigene10281 biogeco2 v2.0 424
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAF02878.1|AC009525_12 Unknown protein [Arabidopsis thaliana] gb|AAM62805.1| thiamin pyrophosphokinase, putative [Arabidopsis thaliana] gb|AEE27489.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase 0.0
C-terminus
biog2_v2.0_unigene11583 biogeco2 v2.0 210
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: tr=Putative histidine kinase; pekinensis). 0.0
Blast2go: histidine kinase 0.0
Internal
biog2_v2.0_unigene14130 biogeco2 v2.0 266
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: sp=Histidine kinase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase 0.0
Putative C-terminus
biog2_v2.0_unigene14743 biogeco2 v2.0 340
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine kinase 0.0
Putative C-terminus
biog2_v2.0_unigene16194 biogeco2 v2.0 156
AutoFact: Arginyl-tRNA--protein transferase 1 n=1 Tax=Ricinus communis RepID=B9SLM9_RICCO 0.0
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain