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Assembly Name: biogeco2 v2.0

Name: nuclease activity

Term: GO:0004518  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene526 biogeco2 v2.0 602
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene1266 biogeco2 v2.0 550
AutoFact: putative wound-responsive protein [Arabidopsis thaliana] ref|NP_001031068.1| putative wound-responsive protein [Arabidopsis thaliana] gb|AAK59521.1| unknown protein [Arabidopsis thaliana] gb|AAL15188.1| unknown protein [Arabidopsis thaliana] dbj|BAH20173. 0.0
Blast2go: bifunctional nuclease in basal defense response 1 0.0
unknown
biog2_v2.0_unigene2204 biogeco2 v2.0 361
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 4.09715e-14
unknown
biog2_v2.0_unigene3122 biogeco2 v2.0 1088
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene3643 biogeco2 v2.0 259
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
Internal
biog2_v2.0_unigene4337 biogeco2 v2.0 358
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Complete
biog2_v2.0_unigene4496 biogeco2 v2.0 972
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene5027 biogeco2 v2.0 970
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene5088 biogeco2 v2.0 640
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: sp=Chaperone protein ClpC1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene7148 biogeco2 v2.0 785
AutoFact: putative wound-responsive protein [Arabidopsis thaliana] ref|NP_001031068.1| putative wound-responsive protein [Arabidopsis thaliana] gb|AAK59521.1| unknown protein [Arabidopsis thaliana] gb|AAL15188.1| unknown protein [Arabidopsis thaliana] dbj|BAH20173. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional nuclease in basal defense response 1 0.0
Putative N-terminus
biog2_v2.0_unigene7262 biogeco2 v2.0 606
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene10157 biogeco2 v2.0 282
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: flap endonuclease-1 0.0
Internal
biog2_v2.0_unigene10243 biogeco2 v2.0 631
AutoFact: Ca(2+)-dependent DNase [Populus tomentosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dnase 2 0.0
C-terminus
biog2_v2.0_unigene10918 biogeco2 v2.0 330
AutoFact: Endonuclease/exonuclease/phosphatase family protein-like n=2 Tax=Oryza sativa RepID=Q5ZE24_ORYSJ 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 6.5861e-44
Internal
biog2_v2.0_unigene12840 biogeco2 v2.0 399
AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uvrb uvrc motif-containing protein 0.0
C-terminus
biog2_v2.0_unigene14026 biogeco2 v2.0 229
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Putative N-terminus
biog2_v2.0_unigene16354 biogeco2 v2.0 398
AutoFact: exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100] emb|CAE78316.1| Exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100] 1.0e-35
FL-Next: sp=Apurinic endonuclease-redox protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: exodeoxyribonuclease iii 0.0
Internal
biog2_v2.0_unigene17595 biogeco2 v2.0 581
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene17795 biogeco2 v2.0 666
AutoFact: Ca(2+)-dependent DNase [Populus tomentosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dnase 2 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain